CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g36020

Gene name HVA22J (HVA22-LIKE PROTEIN J)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.91 95.6 At2g36020 818175 HVA22J (HVA22-LIKE PROTEIN J) F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPFO S.X. H.G.
0.80 89.8 At3g02810 821236 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOPBFVA S.X. H.G.
0.80 89.8 At2g43230 818924 serine/threonine protein kinase, putative F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA S.X. H.G.
0.79 89.1 At1g50610 841483 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOFBVA S.X. H.G.
0.79 89.1 At5g18910 832009 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:peroxisome;MPOBFVA S.X. H.G.
0.78 88.6 At1g79860 844325 ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12) Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth Growth. S.X. H.G.
0.77 88.0 At2g21480 816687 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA S.X. H.G.
0.77 88.0 At1g02000 839289 GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2) UDP-D-glucuronate 4-epimerase S.X. H.G.
0.76 87.4 At2g38500 818432 - F:molecular_function unknown;P:biological_process unknown;C:unknown;P S.X. H.G.
0.75 86.9 At4g07960 826301 ATCSLC12 (CELLULOSE-SYNTHASE LIKE C12) encodes a gene similar to cellulose synthase S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
172.2 100.0 GSM239253 CaMV::DME pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
169.7 100.0 GSM239251 Columbia glabrous (C24) wild type pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
161.5 99.9 E-MEXP-1138-raw-cel-1432772586
160.9 99.9 E-MEXP-1138-raw-cel-1432772714
153.4 99.9 E-MEXP-1138-raw-cel-1432772522
151.7 99.9 E-MEXP-1138-raw-cel-1432772618
151.0 99.9 E-MEXP-1138-raw-cel-1432772554
148.9 99.9 E-MEXP-1138-raw-cel-1432772682
143.5 99.9 GSM131636 ATGE_73_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
141.7 99.9 E-MEXP-1138-raw-cel-1432772906
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.03 1e-4 48 At4g00200 828162 DNA binding F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMBO C.G. S.X.
0.02 2e-2 40 At5g08139 830709 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;PMOFVBA C.G. S.X.
0.03 2e-2 40 At1g31630 840050 AGL86 (AGAMOUS-LIKE 86) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOFB C.G. S.X.
0.02 4e-1 36 At5g55730 835667 FLA1 (FASCICLIN-LIKE ARAB INOGALACTAN 1) fasciclin-like arabinogalactan-protein 1 (Fla1) C.G. S.X.
0.03 4e-1 36 At5g48920 834950 TED7 (TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7) F:molecular_function unknown;P:secondary cell wall biogenesis;C:unknown;MPOBFVA C.G. S.X.
0.01 4e-1 36 At4g01985 2745601 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA C.G. S.X.
0.02 4e-1 36 At4g13580 826991 disease resistance-responsive family protein F:molecular_function unknown;P:unknown;C:endomembrane system;PB C.G. S.X.
0.01 4e-1 36 At3g50370 824199 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVA C.G. S.X.
0.05 4e-1 36 At1g19950 838584 HVA22H (HVA22-LIKE PROTEIN H (ATHVA22H)) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e-1 38 Glycine max GmaAffx.85705.1.S1_at BE803998 - - 8e-1 At2g28710 zinc finger (C2H2 type) family protein C.G. S.X.
0.03 2e-1 36 Hordeum vulgare Contig25269_at Contig25269 - - 1e+0 At1g53785 unknown protein C.G. S.X.
0.05 5e-2 40 Oryza sativa OsAffx.7680.1.S1_at - - - 0 C.G. S.X.
0.17 1e-11 71 Populus trichocarpa PtpAffx.206568.1.S1_at pmrna13031 hypothetical protein - 4e-12 At2g36020 HVA22J (HVA22-LIKE PROTEIN J) C.G. S.X.
0.04 1e-1 38 Triticum aestivum Ta.15685.1.S1_at CA486296 - - 4e+0 At5g20635 - C.G. S.X.
0.04 2e-3 42 Vitis vinifera 1609989_at CF415187 - - 2e+1 At4g08190 Ras-related GTP-binding protein, putative C.G. S.X.
0.04 7e-4 44 Zea mays Zm.6822.2.A1_a_at CO518852 - - 3e-2 At5g42560 abscisic acid-responsive HVA22 family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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