Gene omics information

Query gene ID At2g35650
Gene name ATCSLA07 (CELLULOSE SYNTHASE LIKE)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g35650818134ATCSLA07 (CELLULOSE SYNTHASE LIKE)a member of Glycosyltransferase- Family 2 and encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein. Mutants exhibit defects in pollen tube growth and embryo development. The defective embryonic development was associated with reduced proliferation and failed cellularization of the endosperm.S.X.H.G.
0.4558.3At5g633808364574-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinEncodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis.S.X.H.G.
0.4457.2At2g32040817764integral membrane transporter family proteinThe At2g32040 gene product has been demonstrated to mediate folate monoglutamate transport involved in tetrahydrofolate biosynthesis. It also mediates transport of antifolates, such as methotrexate and aminopterin. The gene is expressed in both chloroplast and non-green plastids.S.X.H.G.
0.4253.9At1g01540839533protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAS.X.H.G.
0.4152.4At1g14140837973mitochondrial substrate carrier family proteinF:transporter activity, binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPOVS.X.H.G.
0.4152.4At4g09640826550-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOBAS.X.H.G.
0.3846.7At2g30980817649ASKdZeta (Arabidopsis SHAGGY-related protein kinase dZeta)Encodes a GSK3-like protein kinase. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts.S.X.H.G.
0.3846.7At5g18500831968protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAS.X.H.G.
0.3846.7At4g38040829960exostosin family proteinF:catalytic activity;P:biological_process unknown;C:chloroplast, membrane;PMOBFVS.X.H.G.
0.3846.7At2g37585818335glycosyltransferase family 14 protein / core-2/I-branching enzyme family proteinF:acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:membrane;MPOBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
24.599.6GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
19.799.6GSM38668NSNPGSE2268Arabidopsis polysome microarray
15.399.4GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
13.799.4GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
12.599.3GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
12.499.3GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
12.199.3GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
11.999.3GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
11.899.3GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
11.499.3GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.242e-20101At1g23480838956ATCSLA03 (CELLULOSE SYNTHASE-LIKE A3)encodes a gene similar to cellulose synthaseC.G.S.X.
0.032e-1171At4g07960826301ATCSLC12 (CELLULOSE-SYNTHASE LIKE C12)encodes a gene similar to cellulose synthaseC.G.S.X.
0.049e-756At2g24630816999ATCSLC08encodes a gene similar to cellulose synthaseC.G.S.X.
0.111e-552At4g13410826972ATCSLA15encodes a gene similar to cellulose synthaseC.G.S.X.
0.082e-448At5g03760831734ATCSLA09encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.C.G.S.X.
0.112e-448At3g56000824766ATCSLA14encodes a gene similar to cellulose synthaseC.G.S.X.
0.031e-242At5g16190831477ATCSLA11encodes a gene similar to cellulose synthaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e-346Glycine maxGma.10876.2.S1_a_atCA800320--2e-7At5g22740ATCSLA02C.G.S.X.
0.073e-240Hordeum vulgareContig10369_atContig10369--3e-19At5g22740ATCSLA02C.G.S.X.
0.097e-344Oryza sativaOs03g01695009631.m00665-Glycosyl transferase, family 2 domain containingprotein2e-4At4g16590ATCSLA01C.G.S.X.
0.222e-1895Populus trichocarpaPtpAffx.209451.1.S1_atpmrna18726hypothetical protein-6e-36At1g23480ATCSLA03 (CELLULOSE SYNTHASE-LIKE A3)C.G.S.X.
0.031e-346Triticum aestivumTaAffx.11185.1.S1_s_atCD867104--7e-23At4g07960ATCSLC12 (CELLULOSE-SYNTHASE LIKE C12)C.G.S.X.
0.022e-136Vitis vinifera1622115_atCD004218hypothetical protein LOC100257320-5e-1At2g20120COV1 (CONTINUOUS VASCULAR RING)C.G.S.X.
0.059e-238Zea maysZm.13803.1.A1_atBE345572hypothetical protein LOC100192112-5e-8At5g22740ATCSLA02C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00359Link to KaPPA-View 4Glucosyltransferase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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