CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g35380

Gene name peroxidase 20 (PER20) (P20)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At2g35380 818105 peroxidase 20 (PER20) (P20) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB S.X. H.G.
0.95 97.0 At5g58860 836003 CYP86A1 (CYTOCHROME P450 86 A1) Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly only in root tissue. S.X. H.G.
0.94 96.7 At1g78990 844239 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFB S.X. H.G.
0.94 96.7 At2g23540 816886 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM S.X. H.G.
0.90 95.1 At5g37690 833748 GDSL-motif lipase/hydrolase family protein F:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBFOM S.X. H.G.
0.90 95.1 At5g44550 834482 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.89 94.6 At4g20390 827787 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P S.X. H.G.
0.71 84.2 At2g47200 819333 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.70 83.5 At1g74460 843787 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM S.X. H.G.
0.67 81.6 At4g38080 829964 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOVBFA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
106.5 99.9 E-MEXP-828-raw-cel-1156922987
95.2 99.9 E-MEXP-828-raw-cel-1156922809
79.9 99.9 E-MEXP-828-raw-cel-1156922968
78.5 99.9 E-MEXP-828-raw-cel-1156922905
77.0 99.9 E-MEXP-828-raw-cel-1156922872
73.1 99.9 E-MEXP-828-raw-cel-1156922891
70.7 99.9 E-MEXP-828-raw-cel-1156922944
65.9 99.8 E-MEXP-828-raw-cel-1156922846
60.0 99.8 GSM75521 slr-1 6h NAA replicate 2 GSE3350 SLR/IAA14-dependent auxin induced lateral root initiation
56.9 99.8 GSM131378 AtGen_6-5522_Genotoxicstress-Roots-12.0h_Rep2 GSE5625 AtGenExpress: Stress Treatments (Genotoxic stress)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.04 1e-4 48 At1g77100 844045 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFO C.G. S.X.
0.03 5e-4 46 At4g16270 827322 peroxidase 40 (PER40) (P40) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM C.G. S.X.
0.03 3e-2 40 At5g14130 831263 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB C.G. S.X.
0.03 1e-1 38 At5g67400 836876 peroxidase 73 (PER73) (P73) (PRXR11) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFO C.G. S.X.
0.03 1e-1 38 At5g51890 835264 peroxidase encodes peroxidase involved in the lignification of tracheary elements (TE) in roots C.G. S.X.
0.01 1e-1 38 At2g23740 816905 nucleic acid binding / transcription factor/ zinc ion binding F:transcription factor activity, zinc ion binding, nucleic acid binding;P:chromatin modification;C:nucleus, intracellular;MOPFB C.G. S.X.
0.01 5e-1 36 At4g38270 829984 GAUT3 (Galacturonosyltransferase 3) Encodes a protein with putative galacturonosyltransferase activity. C.G. S.X.
0.04 5e-1 36 At4g26010 828707 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFO C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 34 Glycine max PsAffx.CL805Contig1_at PsAffx.CL805Contig1 - - 9e-1 At4g21620 glycine-rich protein C.G. S.X.
0.02 4e+0 32 Hordeum vulgare Contig7666_s_at Contig7666 - - 3e-3 At5g67400 peroxidase 73 (PER73) (P73) (PRXR11) C.G. S.X.
0.04 6e-2 40 Oryza sativa Os11g0210100 AU096632 - Peroxidase 43 precursor (EC 1.11.1.7) (AtperoxP43) 2e+0 At1g66690 S-adenosyl-L-methionine:carboxyl methyltransferase family protein C.G. S.X.
0.07 2e-1 38 Populus trichocarpa PtpAffx.225658.1.S1_s_at pmrna45158 hypothetical protein - 6e-11 At1g14550 anionic peroxidase, putative C.G. S.X.
0.04 5e-1 36 Triticum aestivum TaAffx.85245.1.S1_at CA624428 - - 1e-3 At5g66390 peroxidase 72 (PER72) (P72) (PRXR8) C.G. S.X.
0.03 4e-2 38 Vitis vinifera 1608269_at CF514703 hypothetical protein LOC100258232 - 4e+0 At5g54150 unknown protein C.G. S.X.
0.02 3e+0 32 Zea mays Zm.1415.1.A1_at BG840912 hypothetical protein LOC100191304 - 3e-9 At5g67400 peroxidase 73 (PER73) (P73) (PRXR11) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006979 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00413 Peroxidase, class III

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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