Gene omics information

Query gene ID At2g35000
Gene name zinc finger (C3HC4-type RING finger) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4355.3At2g35000818064zinc finger (C3HC4-type RING finger) family proteinE3 ligase-like protein induced by chitin oligomers.S.X.H.G.
0.8491.9At2g21045816639-F:unknown;P:aging;C:unknown;BOPAFMS.X.H.G.
0.7586.9At1g31885840079transporterF:transporter activity;P:transport;C:integral to membrane, membrane;BPOMFAVS.X.H.G.
0.7385.5At5g43350834353PHT1Encodes an inorganic phosphate transporter. Mutants display enhanced arsenic accumulation.S.X.H.G.
0.7284.8At1g78000844135SULTR1Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes.S.X.H.G.
0.7284.8At2g42350818836zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVS.X.H.G.
0.6982.9At2g44380819045DC1 domain-containing proteinF:unknown;P:unknown;C:unknown;PMOS.X.H.G.
0.6781.6At5g05400830422disease resistance protein (CC-NBS-LRR class), putativeF:protein binding, ATP binding;P:N-terminal protein myristoylation, defense response, apoptosis;C:chloroplast;PMBOFAS.X.H.G.
0.6478.9At2g29995817550unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.6176.7At3g24290822017AMT1F:ammonium transmembrane transporter activity;P:ammonium transport, transport;C:endomembrane system, membrane;OBMFPAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
67.499.8GSM179958Arabidopsis roots, air treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
63.799.8GSM265433Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
62.299.8GSM179976Arabidopsis ein2 mutant roots, mock treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
58.199.8GSM179959Arabidopsis roots, air treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
57.699.8GSM179963Arabidopsis aux1 mutant roots, air treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
55.599.8GSM179972Arabidopsis roots, mock treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
53.799.8GSM231196wild-type at T0.5, biological rep1GSE9148Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
52.499.8GSM179975Arabidopsis ein2 mutant roots, mock treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
51.199.8GSM265432Arabidopsis, root, longitudinal zone 4, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
47.999.8GSM142730CH001_ATH1_A009-Hampt-wsc_repeatGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.211e-32141At2g34990818063zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:endomembrane system;PMOFVBC.G.S.X.
0.104e-1479At1g22500838856zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:endomembrane system;PMOFVBC.G.S.X.
0.022e-654At3g05200819684ATL6Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6).C.G.S.X.
0.061e-552At1g35330840422zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:endomembrane system;PMOFVBC.G.S.X.
0.094e-550At4g09100826488zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:endomembrane system;PMOFVBC.G.S.X.
0.052e-344At1g72200843552zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVBC.G.S.X.
0.079e-342At4g09120826490zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:endomembrane system;PMOFVBC.G.S.X.
0.041e-138At5g27420832801zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:response to chitin, response to abscisic acid stimulus;C:endomembrane system;PMOFVC.G.S.X.
0.011e-138At3g18440821373AtALMT9 (aluminum-activated malate transporter 9)Belongs to the aluminum-activated malate transporter family. Encodes a vacuolar malate channel. Expressed in all parts of plants. Almost exclusively expressed in mesophyll cells of leaves.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-448Glycine maxGmaAffx.28563.1.S1_atBQ094213--9e-7At1g22500zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.021e+034Hordeum vulgareHVSMEa0003D12r2_atHVSMEa0003D12r2--3e+0At4g00335RHB1AC.G.S.X.
0.031e+036Oryza sativaOs.26749.1.S1_at---0C.G.S.X.
0.042e-448Populus trichocarpaPtpAffx.210927.1.S1_atpmrna21467hypothetical protein-5e-4At4g09100zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.022e+034Triticum aestivumTaAffx.85715.1.S1_atCA620238--4e-11At5g0296040S ribosomal protein S23 (RPS23B)C.G.S.X.
0.027e-134Vitis vinifera1622122_atCA817133--3e+0At5g06710HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA)C.G.S.X.
0.036e-238Zea maysZm.8037.1.A1_atBM073083--1e+0At5g58580ATL63 (ARABIDOPSIS TÓC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010200A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.
XGO:0050832Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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