Gene omics information

Query gene ID At2g34850
Gene name MEE25 (maternal effect embryo arrest 25)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5974.7At2g34850818050MEE25 (maternal effect embryo arrest 25)F:coenzyme binding, UDP-glucose 4-epimerase activity, binding, catalytic activity;P:embryonic development ending in seed dormancy, pollen tube development, nucleotide-sugar metabolic process;C:cellular_component unknown;BOPMAFVS.X.H.G.
0.2726.2At2g21590816697APL4Encodes the large subunit of ADP-glucose pyrophosphorylase, the enzyme which catalyzes the first and limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described.S.X.H.G.
0.2014.4At1g74810843820BOR5F:anion exchanger activity;P:anion transport;C:integral to membrane, membrane;MFPOBVS.X.H.G.
0.030.6At5g57050835809ABI2 (ABA INSENSITIVE 2)Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.S.X.H.G.
0.000.0At4g30830829207unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MOFBPAVS.X.H.G.
0.000.0At5g09930830854ATGCN2member of GCN subfamilyS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
625.1100.0E-MEXP-1443-raw-cel-1581869573
177.1100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
159.299.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
143.299.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
133.699.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
130.299.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
125.199.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
124.199.9GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
123.199.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
120.099.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.592e-154545At1g30620839942MUR4 (MURUS 4)encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans.C.G.S.X.
0.362e-55216At5g44480834475DUR (DEFECTIVE UGE IN ROOT)mutant has Altered lateral root; UDP Glucose EpimeraseC.G.S.X.
0.501e-47190At4g20460827794NAD-dependent epimerase/dehydratase family proteinF:coenzyme binding, UDP-glucose 4-epimerase activity, binding, catalytic activity;P:galactose metabolic process, cellular metabolic process, nucleotide-sugar metabolic process, metabolic process;C:endomembrane system;BOPMAFVC.G.S.X.
0.013e-136At5g41730834176protein kinase family proteinF:protein serine/threonine/tyrosine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOFBVAC.G.S.X.
0.013e-136At4g28710828991XIHmember of Myosin-like proteinsC.G.S.X.
0.013e-136At1g30690839949SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinF:transporter activity;P:transport;C:cytosol, nucleus, plasma membrane;OMBFPVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.312e-34147Glycine maxGmaAffx.92678.1.S1_s_atCF808403--6e-35At2g34850MEE25 (maternal effect embryo arrest 25)C.G.S.X.
0.312e-44178Hordeum vulgareContig10276_atContig10276--8e-44At2g34850MEE25 (maternal effect embryo arrest 25)C.G.S.X.
0.281e-1481Oryza sativaOs07g0139400AK065558.1-NAD-dependent epimerase/dehydratase family protein2e-14At2g34850MEE25 (maternal effect embryo arrest 25)C.G.S.X.
0.476e-59228Populus trichocarpaPtpAffx.34704.1.S1_atCV258561hypothetical protein-7e-59At2g34850MEE25 (maternal effect embryo arrest 25)C.G.S.X.
0.261e-22107Triticum aestivumTa.4371.2.A1_a_atCA712279--2e-22At2g34850MEE25 (maternal effect embryo arrest 25)C.G.S.X.
0.484e-66250Vitis vinifera1614184_atCF604220hypothetical protein LOC100250343-1e-47At4g20460NAD-dependent epimerase/dehydratase family proteinC.G.S.X.
0.203e-1271Zea maysZm.9488.1.A1_atBM336207UDP-arabinose 4-epimerase 2-4e-14At1g30620MUR4 (MURUS 4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0048868The process whose specific outcome is the progression of a pollen tube over time, from its initial formation to a mature structure.
XGO:0009793The process whose specific outcome is the progression of the embryo over time, from zygote formation to the end of seed dormancy. An example of this process is found in Arabidopsis thaliana.
CGO:0009225The chemical reactions and pathways involving nucleotide-sugars, any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00134Link to KaPPA-View 4UDP-Sugar metabolism



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00520Link to KEGG PATHWAYAmino sugar and nucleotide sugar metabolism
01100Link to KEGG PATHWAYMetabolic pathways
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