Gene omics information

Query gene ID At2g34800
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5065.3At2g34800818045unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8190.4At2g01500814678PFS2 (PRETTY FEW SEEDS 2)PFS2 encodes a homeodomain gene that is a member of the WUS clade of transcription factors. It delays differentiation and maturation of primordia and regulates ovule patterning. The pfs2 mutant exhibits developmental defects in the maternal integuments and gametophyte, specifically, the boundary between the chalaza and the nucellus shifted towards the distal end of pfs2 ovule primordia. In addition, leaves displayed curling and petals were wavy and crenulated. Overexpression of PFS2 affects floral organ and leaf development. Single- and double-mutant analyses reveal that PFS2 activity represses AGAMOUS expression in young floral primordia. Also involved in regulation of response to low temperature.S.X.H.G.
0.7788.0At2g40440818638BTB/POZ domain-containing proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;PMOS.X.H.G.
0.7586.9At1g52430841674ubiquitin carboxyl-terminal hydrolase-relatedF:ubiquitin thiolesterase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;POBMFS.X.H.G.
0.7486.1At4g16050827290unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVAS.X.H.G.
0.7486.1At4g25510828655unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7385.5At4g02970828121AT7SL-1 (Arabidopsis 7SL RNA 1)Signal recognition particle. Type 4 of RNA polymerase III dependent genes.S.X.H.G.
0.7385.5At1g29730839851ATP binding / kinase/ protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseF:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.6882.2At5g44330834458male sterility MS5 family proteinF:binding;P:biological_process unknown;C:unknown;POBAS.X.H.G.
0.6781.6At3g57900824959unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
481.2100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
444.3100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
252.4100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
198.9100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.014e+030At4g39450830100unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOC.G.S.X.
0.024e+030At3g24300822018AMT1Encodes a plasma membrane localized ammonium transporter.C.G.S.X.
0.014e+030At3g14570820683ATGSL04 (glucan synthase-like 4)encodes a protein similar to callose synthaseC.G.S.X.
0.014e+030At2g05710815120aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putativeProtein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.C.G.S.X.
0.054e+030At1g71050843445heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PFBMC.G.S.X.
0.022e+128At5g38130833793transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:unknown;C:unknown;PFC.G.S.X.
0.012e+128At5g43900834412MYA2 (ARABIDOPSIS MYOSIN 2)Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner.C.G.S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.064e-134Glycine maxGmaAffx.24533.1.S1_atBU762311--8e-1At2g34800unknown proteinC.G.S.X.
0.058e+028Hordeum vulgareHW09H22u_atHW09H22u--1e+0At4g13230late embryogenesis abundant domain-containing protein / LEA domain-containing proteinC.G.S.X.
0.042e+032Oryza sativaOs01g0710600NM_191699.1--4e+0At3g11820SYP121 (SYNTAXIN OF PLANTS 121)C.G.S.X.
0.066e+030Populus trichocarpaPtpAffx.203276.1.S1_atpmrna6493hypothetical protein-3e-3At4g11190disease resistance-responsive family protein / dirigent family proteinC.G.S.X.
0.064e+030Triticum aestivumTaAffx.66695.1.A1_atBG906502--3e+0At1g15620unknown proteinC.G.S.X.
0.095e+028Vitis vinifera1614644_x_atCF205159.1--1e+0At2g04930NLI interacting factor (NIF) family proteinC.G.S.X.
0.067e+028Zea maysZmAffx.1359.1.S1_at40794996-47--1e+1At5g5729060S acidic ribosomal protein P3 (RPP3B)C.G.S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage