CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g34315

Gene name disease resistance protein-related

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.74 86.1 At2g34315 817993 disease resistance protein-related F:GTP binding;P:biological_process unknown;C:cellular_component unknown;PMF S.X. H.G.
0.81 90.4 At2g33520 817917 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMF S.X. H.G.
0.81 90.4 At1g29680 839845 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPF S.X. H.G.
0.81 90.4 At2g19320 816449 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.80 89.8 At2g23640 816896 reticulon family protein (RTNLB13) F:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;MPO S.X. H.G.
0.80 89.8 At5g55750 835669 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBVA S.X. H.G.
0.79 89.1 At1g75490 843885 DNA binding / transcription factor encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. S.X. H.G.
0.79 89.1 At5g01670 831701 aldose reductase, putative F:oxidoreductase activity;P:oxidation reduction;C:unknown;BMOFPA S.X. H.G.
0.75 86.9 At1g24735 839082 O-methyltransferase F:O-methyltransferase activity;P:unknown;C:cytosol;BOPMFA S.X. H.G.
0.74 86.1 At4g09610 826546 GASA2 (GAST1 PROTEIN HOMOLOG 2) F:molecular_function unknown;P:response to gibberellin stimulus;C:endomembrane system;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
674.2 100.0 GSM133304 RIKEN-NAKABAYASHI1B GSE5700 AtGenExpress: Effect of ABA during seed imbibition
284.0 100.0 GSM133303 RIKEN-NAKABAYASHI1A GSE5700 AtGenExpress: Effect of ABA during seed imbibition
244.2 100.0 GSM10454 WT Post-Mature Green Seed 1 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
207.6 100.0 GSM131706 ATGE_84_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
180.4 100.0 GSM131701 ATGE_82_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
167.2 100.0 GSM10484 lec1-1 Post-Mature Green Seed 2 GSE1051 Seed development in LEAFY COTYLEDON1 mutants
166.4 100.0 GSM131707 ATGE_84_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
163.2 99.9 GSM10456 WT Post-Mature Green Seed 2 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
139.0 99.9 GSM131702 ATGE_82_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
132.0 99.9 GSM131708 ATGE_84_D GSE5634 AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.03 6e-3 42 At1g33870 840284 avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putative F:GTP binding;P:response to bacterium;C:cellular_component unknown;MPOB C.G. S.X.
0.03 2e-2 40 At4g34990 829651 AtMYB32 (myb domain protein 32) Member of the R2R3 factor gene family. C.G. S.X.
0.01 9e-2 38 At3g22520 821823 unknown protein F:unknown;P:biological_process unknown;C:chloroplast stroma, chloroplast, chloroplast envelope;OMBFPA C.G. S.X.
0.05 4e-1 36 At1g33830 840278 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein F:GTP binding;P:response to bacterium;C:cellular_component unknown;MPOB C.G. S.X.
0.04 1e+0 34 At5g16023 5008214 RTFL18 (ROTUNDIFOLIA LIKE 18) F:molecular_function unknown;P:shoot development;C:cellular_component unknown;P C.G. S.X.
0.01 1e+0 34 At4g32180 829351 ATPANK2 (PANTOTHENATE KINASE 2) Encodes a protein with pantothenate kinase activity. C.G. S.X.
0.01 6e+0 32 At5g28320 832916 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBAV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-1 36 Glycine max GmaAffx.93241.1.S1_at CF808966 - - 1e+0 At1g75400 protein binding / zinc ion binding C.G. S.X.
0.03 7e-1 34 Hordeum vulgare HZ62C10r_at HZ62C10r - - 8e-1 At2g34315 disease resistance protein-related C.G. S.X.
0.03 3e+0 34 Oryza sativa Os.20809.1.S1_at - - - 0 C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.121670.1.A1_at CV231005 - - 5e+0 At5g11120 unknown protein C.G. S.X.
0.03 1e-1 38 Triticum aestivum Ta.8213.1.A1_at BQ161605 - - 8e-2 At2g34315 disease resistance protein-related C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1608525_at CF415433 hypothetical protein LOC100248018 - 3e-12 At4g15900 PRL1 (PLEIOTROPIC REGULATORY LOCUS 1) C.G. S.X.
0.03 6e-1 34 Zea mays Zm.10911.1.A1_x_at BM340657 - - 2e+1 Atcg01060 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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