Gene omics information

Query gene ID At2g34180
Gene name CIPK13 (CBL-INTERACTING PROTEIN KINASE 13)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At2g34180817979CIPK13 (CBL-INTERACTING PROTEIN KINASE 13)Encodes CBL-interacting protein kinase 13 (CIPK13).S.X.H.G.
0.8693.1At3g29410822602terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POS.X.H.G.
0.6781.6At4g08380826395proline-rich extensin-like family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPFOBVAS.X.H.G.
0.6075.7At3g60270825198uclacyanin, putativeF:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;POBVFMAS.X.H.G.
0.4050.8At5g19890832111peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:nucleus, cytoplasm;PFOBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
335.7100.0GSM265423Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
157.299.9GSM157323Hammond_3-16_Control-root_Rep3_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plants
115.299.9GSM142725CH001_ATH1_A004-Hampt-c1aGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
115.199.9GSM142732CH001_ATH1_A011-Hampt-c4cGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
115.199.9GSM142723CH001_ATH1_A002-Hampt-akaGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
107.799.9GSM142729CH001_ATH1_A008-Hampt-c1bGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
103.299.9GSM157315Hammond_3-5_Potassium-starved-root_Rep1_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plants
90.999.9GSM142730CH001_ATH1_A009-Hampt-wsc_repeatGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
89.799.9GSM142724CH001_ATH1_A003-Hampt-c4a_repeatGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
84.199.9E-MEXP-828-raw-cel-1156922905
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.601e-58228At1g29230839797CIPK18 (CBL-INTERACTING PROTEIN KINASE 18)Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.20), which has also been reported as a member of the CBL-interacting protein kinases (CIPK18).C.G.S.X.
0.256e-2099At4g18700827604CIPK12 (CBL-INTERACTING PROTEIN KINASE 12)Encodes CBL-interacting protein kinase 12 (CIPK12).C.G.S.X.
0.181e-1171At5g45810834621CIPK19 (CBL-INTERACTING PROTEIN KINASE 19)Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.5), which has also been reported as a member of the CBL-interacting protein kinases (CIPK19).C.G.S.X.
0.048e-1065At4g30960829221SIP3 (SOS3-INTERACTING PROTEIN 3)Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance.C.G.S.X.
0.078e-1065At2g30360817586SIP4 (SOS3-INTERACTING PROTEIN 4)Encodes a SOS2-like protein kinase that is a member of the CBL-interacting protein kinase family.Loss of function mutants show a decrease in sensitivity to high pH.Phosphorylates AHA2, a plasma membrane H+ ATPase.This phosphorylation appears to regulate the activity of the proton transporter.C.G.S.X.
0.063e-654At5g45820834622CIPK20 (CBL-INTERACTING PROTEIN KINASE 20)Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain.C.G.S.X.
0.041e-552At2g25090817047CIPK16 (CBL-INTERACTING PROTEIN KINASE 16)Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.18), which has also been reported as a member of the CBL-interacting protein kinases (CIPK16).C.G.S.X.
0.022e-448At5g58380835951SIP1 (SOS3-INTERACTING PROTEIN 1)Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase.C.G.S.X.
0.058e-446At5g10930830960CIPK5 (CBL-INTERACTING PROTEIN KINASE 5)Encodes CBL-interacting protein kinase 5 (CIPK5).C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.092e-861Glycine maxGmaAffx.74306.1.S1_atBU081121--1e-46At4g18700CIPK12 (CBL-INTERACTING PROTEIN KINASE 12)C.G.S.X.
0.061e-448Hordeum vulgareContig13973_atContig13973--5e-5At5g58380SIP1 (SOS3-INTERACTING PROTEIN 1)C.G.S.X.
0.064e-448Oryza sativaOs01g0206700AK065589.1-CBL-interacting protein kinase 21e-3At5g01810CIPK15 (CBL-INTERACTING PROTEIN KINASE 15)C.G.S.X.
0.131e-656Populus trichocarpaPtpAffx.5651.1.S1_atCV241410hypothetical protein-1e-64At4g18700CIPK12 (CBL-INTERACTING PROTEIN KINASE 12)C.G.S.X.
0.061e-242Triticum aestivumTaAffx.112167.1.S1_atCA626470--1e-12At5g07070CIPK2 (CBL-INTERACTING PROTEIN KINASE 2)C.G.S.X.
0.062e-136Vitis vinifera1619559_atBQ800061--3e-25At1g01140CIPK9 (CBL-INTERACTING PROTEIN KINASE 9)C.G.S.X.
0.051e-344Zea maysZm.746.1.A1_atAF141378.1protein kinase PK4-7e-8At5g01820ATSR1 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
LGO:0007165The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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