Gene omics information

Query gene ID At2g34020
Gene name calcium ion binding
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7788.0At2g34020817963calcium ion bindingF:calcium ion binding;P:biological_process unknown;C:unknown;POMBFS.X.H.G.
0.6176.7At5g63650836485SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5)encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.S.X.H.G.
0.5065.3At4g11610826766C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFS.X.H.G.
0.5065.3At5g02260831736ATEXPA9 (ARABIDOPSIS THALIANA EXPANSIN A9)member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)S.X.H.G.
0.3338.1At2g19660816485DC1 domain-containing proteinF:molecular_function unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMOS.X.H.G.
0.2115.8At4g32460829381-F:molecular_function unknown;P:biological_process unknown;C:plant-type cell wall;PBS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
73.999.9GSM133974Birnbaum_1-4_StageI-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis root
52.199.8GSM133118RIKEN-YAMAUCHI1BGSE5687AtGenExpress: Different temperature treatment of seeds
47.599.8GSM134515Col-0_4day_dark_+lincomycin_rep1GSE5759red illumination w/o lincomycin
44.999.8GSM299329pkl Mutant Germinating Seeds With Solvent Treatment Only Set 3 of 6GSE11852Effect of uniconazole on wt and pkl mutant germinating seeds
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.549e-78291At2g34030817964calcium-binding EF hand family proteinF:calcium ion binding;P:biological_process unknown;C:endomembrane system;PMOFBAC.G.S.X.
0.287e-48192At1g29020839776calcium-binding EF hand family proteinF:calcium ion binding;P:unknown;C:endomembrane system;PMOAFC.G.S.X.
0.022e-138At1g70670843404caleosin-related family proteinF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;PFOC.G.S.X.
0.019e-136At5g66960836830prolyl oligopeptidase family proteinF:serine-type peptidase activity, serine-type endopeptidase activity;P:proteolysis;C:membrane;OBMPFAVC.G.S.X.
0.029e-136At2g21810816717CHP-rich zinc finger protein, putativeF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.019e-136At2g22910816822GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family proteinF:amino-acid N-acetyltransferase activity, N-acetyltransferase activity;P:arginine biosynthetic process, amino acid biosynthetic process, metabolic process;C:cytoplasm;BOAFPC.G.S.X.
0.019e-136At2g38780818460unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBMC.G.S.X.
0.019e-136At1g64480842756CBL8 (CALCINEURIN B-LIKE PROTEIN 8)calcineurin B-like protein 8, member of plant-specific family of calcium sensor proteins containing 3 EF-hand motifsC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e+036Glycine maxGma.14800.2.S1_atBE610029--3e-27At3g07670SET domain-containing proteinC.G.S.X.
0.024e-136Hordeum vulgareHVSMEg0001H24r2_s_atHVSMEg0001H24r2--8e-1At3g09890ankyrin repeat family proteinC.G.S.X.
0.012e+036Oryza sativaOs05g0171200AK062702.1-Embryo-specific 3 family protein9e-2At2g21060ATGRP2B (GLYCINE-RICH PROTEIN 2B)C.G.S.X.
0.021e+036Populus trichocarpaPtpAffx.224754.1.S1_atpmrna43579hypothetical protein-3e-2At1g61480S-locus protein kinase, putativeC.G.S.X.
0.014e+034Triticum aestivumTaAffx.9628.1.S1_atCA593303--9e-1At2g34020calcium ion bindingC.G.S.X.
0.024e-342Vitis vinifera1614170_atCB970175similar to ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3)-4e+0At5g27200ACP5 (acyl carrier protein 5)C.G.S.X.
0.012e+034Zea maysZm.10728.1.A1_atBQ539251--4e+0At2g10557unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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