CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g33520

Gene name -

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.77 88.0 At2g33520 817917 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMF S.X. H.G.
0.90 95.1 At1g02700 839492 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PMFO S.X. H.G.
0.90 95.1 At1g27990 839692 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.89 94.6 At5g01670 831701 aldose reductase, putative F:oxidoreductase activity;P:oxidation reduction;C:unknown;BMOFPA S.X. H.G.
0.88 94.0 At3g05260 819690 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV S.X. H.G.
0.87 93.5 At3g11050 820276 ATFER2 (ferritin 2) F:oxidoreductase activity, ferric iron binding, binding, transition metal ion binding;P:response to oxidative stress, cellular iron ion homeostasis, response to abscisic acid stimulus, iron ion transport;C:chloroplast;MBPOAF S.X. H.G.
0.86 93.1 At2g19900 816509 ATNADP-ME1 (NADP-malic enzyme 1) The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals. S.X. H.G.
0.83 91.4 At5g55750 835669 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBVA S.X. H.G.
0.83 91.4 At3g12960 820482 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.82 90.9 At4g21020 827849 late embryogenesis abundant domain-containing protein / LEA domain-containing protein F:unknown;P:embryonic development ending in seed dormancy;C:unknown;OMBPFVA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
489.1 100.0 GSM10456 WT Post-Mature Green Seed 2 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
410.5 100.0 GSM131706 ATGE_84_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
373.3 100.0 GSM131701 ATGE_82_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
370.3 100.0 GSM131707 ATGE_84_B GSE5634 AtGenExpress: Developmental series (siliques and seeds)
343.4 100.0 GSM131703 ATGE_83_A GSE5634 AtGenExpress: Developmental series (siliques and seeds)
340.2 100.0 GSM131705 ATGE_83_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
291.0 100.0 GSM131702 ATGE_82_C GSE5634 AtGenExpress: Developmental series (siliques and seeds)
290.0 100.0 GSM133304 RIKEN-NAKABAYASHI1B GSE5700 AtGenExpress: Effect of ABA during seed imbibition
275.9 100.0 GSM10454 WT Post-Mature Green Seed 1 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
265.0 100.0 GSM131708 ATGE_84_D GSE5634 AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.01 2e+0 32 At5g15070 831359 acid phosphatase/ oxidoreductase/ transition metal ion binding F:oxidoreductase activity, transition metal ion binding, acid phosphatase activity;P:unknown;C:cellular_component unknown;MFOPB C.G. S.X.
0.03 2e+0 32 At4g31330 829260 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPO C.G. S.X.
0.02 2e+0 32 At3g12050 820379 Aha1 domain-containing protein F:ATPase activator activity, chaperone binding;P:response to stress;C:cytoplasm;MFOPB C.G. S.X.
0.01 2e+0 32 At3g48770 824038 ATP binding / DNA binding F:DNA binding, ATP binding;P:biological_process unknown;C:chloroplast;PMBOFA C.G. S.X.
0.03 2e+0 32 At2g41380 818736 embryo-abundant protein-related F:methyltransferase activity;P:response to cadmium ion;C:mitochondrion;BPFOMA C.G. S.X.
0.04 2e+0 32 At1g29040 839778 unknown protein F:unknown;P:unknown;C:chloroplast, vacuole;BOP C.G. S.X.
0.01 2e+0 32 At1g61850 842482 galactolipase/ phospholipase Encodes a non-specific lipase that hydrolyzes phospholipids as well as galactolipids, at both sn-1 and sn-2 positions. Involved in basal jasmonic acid biosynthesis by releasing the precursor fatty acid from membrane lipids. Mutant plants were impacted in resistance to fungus B. cinerea. C.G. S.X.
0.02 2e+0 32 At1g80880 844428 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:unknown;POMFBA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-1 36 Glycine max PsAffx.CL475Contig1_at PsAffx.CL475Contig1 - - 3e-1 At2g33520 - C.G. S.X.
0.05 4e-3 40 Hordeum vulgare Contig11540_s_at Contig11540 - - 3e+0 At3g44190 pyridine nucleotide-disulphide oxidoreductase family protein C.G. S.X.
0.06 1e+0 34 Oryza sativa Os10g0138200 9638.m00399 - - 6e-1 At2g33520 - C.G. S.X.
0.05 3e+0 32 Populus trichocarpa PtpAffx.201287.1.S1_at pmrna2553 hypothetical protein - 7e-1 At3g51010 unknown protein C.G. S.X.
0.05 6e-1 34 Triticum aestivum TaAffx.81528.2.S1_at CA693315 - - 9e-1 At2g43950 OEP37 C.G. S.X.
0.05 3e+0 30 Vitis vinifera 1616628_at CK136902.1 hypothetical protein LOC100258493 - 4e-3 At2g02060 transcription factor C.G. S.X.
0.04 4e+0 30 Zea mays Zm.7704.1.A1_at BM079575 hypothetical protein LOC100278612 - 5e-3 At1g62240 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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