CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g33420

Gene name -

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At2g33420 817906 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO S.X. H.G.
0.83 91.4 At5g58170 835929 SVL5 (SHV3-LIKE 5) F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:anchored to membrane;BPOMF S.X. H.G.
0.82 90.9 At1g25240 839107 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related F:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:clathrin coat assembly;C:clathrin coat, mitochondrion;PMFBAO S.X. H.G.
0.82 90.9 At5g12000 831073 kinase F:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVA S.X. H.G.
0.80 89.8 At3g43860 823499 AtGH9A4 (Arabidopsis thaliana Glycosyl Hydrolase 9A4) F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF S.X. H.G.
0.77 88.0 At3g06260 819800 GATL4 (Galacturonosyltransferase-like 4) Encodes a protein with putative galacturonosyltransferase activity. S.X. H.G.
0.76 87.4 At2g24450 816981 FLA3 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 PRECURSOR) F:molecular_function unknown;P:N-terminal protein myristoylation;C:anchored to membrane;PBMOFVA S.X. H.G.
0.74 86.1 At3g17060 820963 pectinesterase family protein F:pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFM S.X. H.G.
0.73 85.5 At2g07040 815274 PRK2A Pollen receptor kinase. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth. S.X. H.G.
0.70 83.5 At5g58050 835917 SVL4 (SHV3-LIKE 4) F:kinase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:anchored to membrane;BPOMF S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
156.6 99.9 E-MEXP-1138-raw-cel-1432772842
153.9 99.9 E-MEXP-1138-raw-cel-1432773098
150.7 99.9 E-MEXP-1138-raw-cel-1432772970
149.2 99.9 E-MEXP-1138-raw-cel-1432773034
146.0 99.9 E-MEXP-1138-raw-cel-1432772906
142.6 99.9 GSM154507 Arabidopsis growing pollen tubes rep1 GSE6696 Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
137.6 99.9 E-MEXP-1138-raw-cel-1432773002
136.5 99.9 E-MEXP-1138-raw-cel-1432773130
135.1 99.9 GSM131637 ATGE_73_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
132.3 99.9 E-MEXP-1138-raw-cel-1432772522
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.69 0 652 At1g04470 839512 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFB C.G. S.X.
0.01 1e-1 40 At5g44720 834501 molybdenum cofactor sulfurase family protein F:molybdenum ion binding, Mo-molybdopterin cofactor sulfurase activity, pyridoxal phosphate binding, catalytic activity;P:biological_process unknown;C:cellular_component unknown;BMFOPA C.G. S.X.
0.01 1e-1 40 At5g22790 832342 RER1 (RETICULATA-RELATED 1) F:molecular_function unknown;P:biological_process unknown;C:mitochondrion, plastid, chloroplast inner membrane, chloroplast envelope;MOBPFVA C.G. S.X.
0.01 1e-1 40 At4g28706 828990 pfkB-type carbohydrate kinase family protein F:kinase activity, ribokinase activity;P:D-ribose metabolic process;C:chloroplast;BOMPAF C.G. S.X.
0.01 4e-1 38 At5g62730 836394 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;BPOMF C.G. S.X.
0.01 2e+0 36 At5g51650 835239 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFB C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e+0 36 Glycine max PsAffx.C99000036_at PsAffx.C99000036 - - 7e-2 At5g19190 unknown protein C.G. S.X.
0.01 8e-4 46 Hordeum vulgare Contig13191_s_at Contig13191 - - 6e+0 At5g50200 WR3 (WOUND-RESPONSIVE 3) C.G. S.X.
0.01 8e-1 38 Oryza sativa OsAffx.4603.1.S1_at - - - 0 C.G. S.X.
0.01 1e-4 50 Populus trichocarpa PtpAffx.57173.1.A1_at CV236318 hypothetical protein - 7e-3 At1g04470 - C.G. S.X.
0.01 2e+0 36 Triticum aestivum TaAffx.113877.1.S1_at CA602679 - - 4e+0 At5g27340 unknown protein C.G. S.X.
0.01 2e+0 34 Vitis vinifera 1611767_at CB340208 - - 3e+0 At2g45840 - C.G. S.X.
0.01 3e+0 34 Zea mays ZmAffx.1448.1.S1_at 40794996-5 - - 7e-1 At4g37730 AtbZIP7 (Arabidopsis thaliana basic leucine-zipper 7) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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