CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g32870

Gene name meprin and TRAF homology domain-containing protein / MATH domain-containing protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.46 59.8 At2g32870 817848 meprin and TRAF homology domain-containing protein / MATH domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOF S.X. H.G.
0.60 75.7 At2g39850 818572 identical protein binding / serine-type endopeptidase F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:plant-type cell wall;BPOFAM S.X. H.G.
0.47 61.2 At1g67865 843114 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.33 38.1 At2g32860 817847 BGLU33 (BETA GLUCOSIDASE 33) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA S.X. H.G.
0.23 19.3 At1g67870 843115 glycine-rich protein F:unknown;P:biological_process unknown;C:unknown;MOBPFAV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
72.0 99.9 E-MEXP-509-raw-cel-829148561
48.4 99.8 GSM77175 04h low CO2 + light replicate A GSE3423 Carbon fixation (endogenous sugar) and light-dependent gene expression
47.0 99.8 E-MEXP-509-raw-cel-829148348
45.8 99.8 GSM131299 AtGen_6-2511_Osmoticstress-Shoots-12.0h_Rep1 GSE5622 AtGenExpress: Stress Treatments (Osmotic stress)
40.1 99.8 E-MEXP-509-raw-cel-829148525
38.8 99.8 E-MEXP-1454-raw-cel-1585858145
36.6 99.7 E-MEXP-509-raw-cel-829148597
36.0 99.7 E-MEXP-509-raw-cel-829148456
34.9 99.7 GSM77177 04h low CO2 + dark replicate A GSE3423 Carbon fixation (endogenous sugar) and light-dependent gene expression
33.7 99.7 GSM268247 WT-drought-1, biological rep 1 GSE10643 Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.72 0 694 At2g32880 817849 meprin and TRAF homology domain-containing protein / MATH domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF C.G. S.X.
0.02 6e-1 36 At5g12050 831078 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFB C.G. S.X.
0.02 6e-1 36 At1g53080 841742 legume lectin family protein F:carbohydrate binding, sugar binding;P:biological_process unknown;C:plant-type cell wall;PBO C.G. S.X.
0.02 2e+0 34 At5g11870 831060 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOP C.G. S.X.
0.01 2e+0 34 At4g19960 827740 potassium ion transmembrane transporter F:potassium ion transmembrane transporter activity;P:potassium ion transport;C:membrane;BPOFAV C.G. S.X.
0.01 2e+0 34 At4g12010 826809 disease resistance protein (TIR-NBS-LRR class), putative F:protein binding, transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAV C.G. S.X.
0.01 2e+0 34 At4g09680 826554 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P C.G. S.X.
0.01 2e+0 34 At3g01370 821288 ATCFM2 (CRM FAMILY MEMBER 2) Encodes a protein containing a CRM domain that is involved in group I and group II intron splicing. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 34 Glycine max GmaAffx.85713.1.S1_at AW396379 - - 3e+0 At1g26350 unknown protein C.G. S.X.
0.02 5e+0 32 Hordeum vulgare HU05P16u_s_at HU05P16u - - 4e+0 At3g29670 transferase family protein C.G. S.X.
0.02 3e-1 38 Oryza sativa OsAffx.21061.1.S1_at - - - 0 C.G. S.X.
0.03 2e-1 38 Populus trichocarpa PtpAffx.208955.1.S1_at pmrna17747 hypothetical protein - 2e-2 At1g35440 CYCT1 C.G. S.X.
0.02 3e+0 34 Triticum aestivum TaAffx.119273.1.S1_at BJ279909 - - 4e+0 At5g50100 - C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1613103_at CD802483 hypothetical protein LOC100249419 - 3e+0 At5g16440 IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1) C.G. S.X.
0.02 1e+0 34 Zea mays Zm.1079.5.A1_a_at M95073.1 - - 6e-3 At1g23730 BCA3 (BETA CARBONIC ANHYDRASE 4) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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