CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g32160

Gene name -

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.53 68.6 At2g32160 817775 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FMOP S.X. H.G.
0.59 74.7 At5g54610 835550 ANK (ankyrin) Induced in response to Salicylic acid. Belongs to the ankyrin repeat protein family. S.X. H.G.
0.53 68.6 At5g60900 836211 RLK1 (RECEPTOR-LIKE PROTEIN KINASE 1) Encodes a receptor-like protein kinase. S.X. H.G.
0.50 65.3 At1g21250 838721 WAK1 (CELL WALL-ASSOCIATED KINASE) cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component. S.X. H.G.
0.47 61.2 At3g08870 820035 lectin protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:endomembrane system;MPOBFVA S.X. H.G.
0.46 59.8 At2g14560 815943 LURP1 (LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA) Encodes LURP1, a member of the LURP cluster (late upregulated in response to Hyaloperonospora parasitica) which exhibits a pronounced upregulation after recognition of the pathogenic oomycte H. parasitica. LURP1 is required for full basal defense to H. parasitica and resistance to this pathogen mediated by the R-proteins RPP4 and RPP5. S.X. H.G.
0.43 55.3 At2g46430 819251 ATCNGC3 (CYCLIC NUCLEOTIDE GATED CHANNEL 3) cyclic nucleotide gated channel (CNGC4), downstream component of the signaling pathways leading to HR/resistance S.X. H.G.
0.38 46.7 At3g04210 819576 disease resistance protein (TIR-NBS class), putative F:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, endomembrane system;PBMO S.X. H.G.
0.35 41.6 At5g10380 830902 RING1 Encodes a RING finger domain protein with E3 ligase activity that is localized to the lipid rafts of the plasma membrane. Expression is increased in response to fungal pathogen. May be involved in regulation of programmed cell death by facilitating degredation of regulation of PDC activators. S.X. H.G.
0.32 35.7 At4g23130 828412 CRK5 (CYSTEINE-RICH RLK5) Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
47.9 99.8 GSM269812 WT leaf-well watered-rep1 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
47.1 99.8 E-MEXP-509-raw-cel-829148703
33.9 99.7 GSM269828 WT leaf-well watered-rep3 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
31.2 99.7 GSM205430 met1-3_leaf_fourth-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
29.6 99.7 GSM269822 T6 leaf-well watered-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
25.8 99.7 GSM269814 T6 leaf-well watered-rep1 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
24.6 99.6 E-ATMX-32-raw-cel-1562974681
23.8 99.6 E-ATMX-32-raw-cel-1562974595
23.4 99.6 E-MEXP-1443-raw-cel-1581869632
20.7 99.6 GSM205428 met1-3_leaf_fourth-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.68 0 898 At2g32170 817776 - F:unknown;P:unknown;C:cellular_component unknown;MFOP C.G. S.X.
0.02 1e-2 42 At5g17900 831658 - F:molecular_function unknown;P:biological_process unknown;C:extracellular region;MOFBPVA C.G. S.X.
0.01 2e-1 38 At5g04680 830346 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOF C.G. S.X.
0.01 2e-1 38 At4g08580 826419 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOFBPVA C.G. S.X.
0.01 2e-1 38 At1g14850 838050 NUP155 Encodes a protein similar to nucleoporin, a a major component of the nuclear pore complex (NPC) involved in cellular nucleo-cytoplasmic transport C.G. S.X.
0.01 6e-1 36 At3g24080 821994 KRR1 family protein F:molecular_function unknown;P:response to salt stress;C:cytosol;MOFBPVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.20 1e-21 105 Glycine max Gma.12593.3.S1_at AW756323 - - 5e-34 At2g32170 - C.G. S.X.
0.10 1e-9 63 Hordeum vulgare Contig10878_s_at Contig10878 - - 1e-21 At2g32170 - C.G. S.X.
0.06 3e-10 67 Oryza sativa Os05g0511300 AK070791.1 - Conserved hypothetical protein 9e-26 At2g32170 - C.G. S.X.
0.44 6e-42 173 Populus trichocarpa PtpAffx.220883.1.S1_at pmrna37349 hypothetical protein - 4e-38 At2g32160 - C.G. S.X.
0.08 2e-4 48 Triticum aestivum Ta.11407.1.S1_at BQ170032 - - 7e-17 At2g32170 - C.G. S.X.
0.21 6e-20 97 Vitis vinifera 1607847_at CF517305 - - 6e-50 At2g32170 - C.G. S.X.
0.06 7e-2 38 Zea mays Zm.3893.1.A1_at CF623496 - - 2e-1 At2g32160 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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