CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g32030

Gene name GCN5-related N-acetyltransferase (GNAT) family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.92 96.0 At2g32030 817763 GCN5-related N-acetyltransferase (GNAT) family protein F:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;BOFPAVM S.X. H.G.
0.91 95.6 At1g68765 843208 IDA (INFLORESCENCE DEFICIENT IN ABSCISSION) Encodes a small protein of 77 amino acids. Loss of function mutations are defective in the process of ethylene independent floral organ abscission. Although the mutants have a normal appearing abscission zone, the floral organs do not abscisce. The peptide appears to be secreted and may function as a ligand. Arabidopsis 35S:IDA lines constitutively overexpressing IDA exhibit earlier abscission of floral organs, showing that the abscission zones are responsive to IDA soon after the opening of the flowers. In addition, ectopic abscission was observed at the bases of the pedicel, branches of the inflorescence, and cauline leaves. The silique valves also dehisced prematurely. S.X. H.G.
0.83 91.4 At4g28460 828963 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.80 89.8 At2g23270 816859 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.67 81.6 At1g35210 840410 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO S.X. H.G.
0.53 68.6 At1g30370 839917 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:unknown;PBOFMV S.X. H.G.
0.53 68.6 At2g37430 818319 zinc finger (C2H2 type) family protein (ZAT11) F:transcription factor activity, zinc ion binding, nucleic acid binding;P:response to chitin, regulation of transcription;C:intracellular;MPOF S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
468.3 100.0 GSM13783 Dexamethasone plus cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
373.0 100.0 GSM13780 Cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
332.2 100.0 GSM13784 Cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
325.0 100.0 GSM13779 Dexamethasone plus cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
284.1 100.0 E-MEXP-807-raw-cel-1173273144
256.3 100.0 E-MEXP-807-raw-cel-1173273088
221.9 100.0 E-MEXP-807-raw-cel-1173273116
205.3 100.0 E-MEXP-807-raw-cel-1173273252
195.0 100.0 E-MEXP-807-raw-cel-1173273170
170.0 100.0 E-MEXP-807-raw-cel-1173273196
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.56 1e-40 167 At2g32020 817762 GCN5-related N-acetyltransferase (GNAT) family protein F:N-acetyltransferase activity;P:response to abscisic acid stimulus, metabolic process;C:cellular_component unknown;BOFPAVM C.G. S.X.
0.02 3e-1 36 At5g67400 836876 peroxidase 73 (PER73) (P73) (PRXR11) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFO C.G. S.X.
0.01 1e+0 34 At5g64420 836563 DNA polymerase V family F:DNA-directed DNA polymerase activity, DNA binding;P:DNA replication, transcription;C:cellular_component unknown;MOFBPV C.G. S.X.
0.01 1e+0 34 At5g43470 834367 RPP8 (RECOGNITION OF PERONOSPORA PARASITICA 8) Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus. C.G. S.X.
0.03 1e+0 34 At4g30170 829140 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB C.G. S.X.
0.02 1e+0 34 At4g37530 829908 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to salt stress;C:endomembrane system;PFO C.G. S.X.
0.02 1e+0 34 At4g37520 829907 peroxidase 50 (PER50) (P50) (PRXR2) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:cytoplasm;PFOM C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e+0 34 Glycine max GmaAffx.51101.1.S1_at BU579058 - - 9e-1 At2g32030 GCN5-related N-acetyltransferase (GNAT) family protein C.G. S.X.
0.03 8e+0 30 Hordeum vulgare EBed02_SQ003_E04_at EBed02_SQ003_E04 - - 1e+0 At1g70850 MLP34 (MLP-LIKE PROTEIN 34) C.G. S.X.
0.04 2e+0 34 Oryza sativa Os02g0757600 9630.m05129 - - 7e-1 At2g32030 GCN5-related N-acetyltransferase (GNAT) family protein C.G. S.X.
0.05 3e-2 40 Populus trichocarpa Ptp.2961.1.S1_at BU863071 hypothetical protein - 2e-2 At2g32030 GCN5-related N-acetyltransferase (GNAT) family protein C.G. S.X.
0.03 2e+1 30 Triticum aestivum TaAffx.58575.3.S1_at CA621094 - - 6e-5 At1g65990 type 2 peroxiredoxin-related / thiol specific antioxidant / mal allergen family protein C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1617653_at CA818371 hypothetical protein LOC100260671 - 5e-2 At4g39280 phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative C.G. S.X.
0.02 7e+0 30 Zea mays Zm.2963.1.A1_at BG842411 naringenin,2-oxoglutarate 3-dioxygenase - 6e+0 At2g14247 Expressed protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0008152 The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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