Gene omics information

Query gene ID At2g31660
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2930.3At2g31660817722SAD2 (SUPER SENSITIVE TO ABA AND DROUGHT2)SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling. Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport. Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity. SAD2 was ubiquitously expressed at low levels in all tissues except flowers. SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress, increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes).S.X.H.G.
0.6378.1At1g80410844381EMB2753 (EMBRYO DEFECTIVE 2753)F:binding;P:embryonic development ending in seed dormancy;C:membrane;OBMAFPVS.X.H.G.
0.2930.3At1g62390842537octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing proteinF:binding;P:unknown;C:unknown;MOFPBAVS.X.H.G.
0.2830.3At5g21160832242La domain-containing protein / proline-rich family proteinF:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus;MFPBOVAS.X.H.G.
0.2624.4At3g52140824378tetratricopeptide repeat (TPR)-containing proteinF:binding;P:biological_process unknown;C:plasma membrane, chloroplast;MBFOPAVS.X.H.G.
0.2522.6At5g19820832102emb2734 (embryo defective 2734)F:lyase activity, binding;P:embryonic development ending in seed dormancy;C:cell wall, phycobilisome;MFOPS.X.H.G.
0.2217.5At3g17970819660atToc64-III (Arabidopsis thaliana translocon at the outer membrane of chloroplasts 64-III)F:binding, carbon-nitrogen ligase activity, with glutamine as amido-N-donor;P:unknown;C:chloroplast;BOMFPAS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.399.6GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
14.699.4GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
13.799.4GSM284391Arabidopsis GPE3GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
12.699.3GSM133307RIKEN-NAKABAYASHI3AGSE5700AtGenExpress: Effect of ABA during seed imbibition
12.399.3GSM311278Laser capture microdissected (LCM) peripheral endosperm at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
11.599.3GSM133308RIKEN-NAKABAYASHI4AGSE5700AtGenExpress: Effect of ABA during seed imbibition
11.099.2GSM284390Arabidopsis GPE2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
10.699.2GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
10.399.2GSM142655MC002_ATH1_A11.3-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.414e-44180At3g59020825071binding / protein transporterF:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;OMFBPVAC.G.S.X.
0.014e-138At1g74470843788geranylgeranyl reductaseEncodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate.C.G.S.X.
0.012e+036At5g12860831126DiT1 (dicarboxylate transporter 1)F:oxoglutarate:malate antiporter activity;P:N-terminal protein myristoylation, malate transport, response to nematode;C:mitochondrion, chloroplast, plastid, membrane, chloroplast envelope;BOMPAFVC.G.S.X.
0.012e+036At4g00440827901unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;OMPBFC.G.S.X.
0.012e+036At4g01410828166harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.112e-1689Glycine maxGmaAffx.87169.1.S1_atBM143493--2e-17At2g31660SAD2 (SUPER SENSITIVE TO ABA AND DROUGHT2)C.G.S.X.
0.139e-1995Hordeum vulgareContig7608_atContig7608--2e-18At2g31660SAD2 (SUPER SENSITIVE TO ABA AND DROUGHT2)C.G.S.X.
0.243e-28129Oryza sativaOsAffx.3910.1.S1_at---0C.G.S.X.
0.531e-91339Populus trichocarpaPtpAffx.202521.1.S1_atpmrna5047hypothetical protein-8e-92At2g31660SAD2 (SUPER SENSITIVE TO ABA AND DROUGHT2)C.G.S.X.
0.016e+034Triticum aestivumTaAffx.52428.1.S1_atCA707937--4e+0At2g47780rubber elongation factor (REF) protein-relatedC.G.S.X.
0.012e+034Vitis vinifera1620705_a_atCD797845hypothetical protein LOC100261014-3e+0At5g60350unknown proteinC.G.S.X.
0.091e-1791Zea maysZm.17654.1.S1_atCK369051hypothetical protein LOC100193617-2e-17At2g31660SAD2 (SUPER SENSITIVE TO ABA AND DROUGHT2)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006606The directed movement of a protein from the cytoplasm to the nucleus.
CGO:0000059The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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