Gene omics information

Query gene ID At2g31530
Gene name EMB2289 (EMBRYO DEFECTIVE 2289)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At2g31530817711EMB2289 (EMBRYO DEFECTIVE 2289)F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:embryonic development ending in seed dormancy, protein secretion;C:chloroplast, membrane;OBPAMS.X.H.G.
0.6781.6At1g23180838926armadillo/beta-catenin repeat family proteinF:binding;P:biological_process unknown;C:chloroplast;PMFOS.X.H.G.
0.3338.1At4g14510827098RNA bindingF:RNA binding;P:biological_process unknown;C:chloroplast;POMFBVAS.X.H.G.
0.135.8At2g33820817949MBAC1encodes a mitochondrial ornithine transporter which exports ornithine from the mitochondrion to the cytosolS.X.H.G.
0.051.1At1g01740839253protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;PMBOFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
38.999.8GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
38.299.8GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
36.199.7GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
35.199.7GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
28.199.7GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.999.7GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
25.899.7GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
24.199.6GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
23.699.6GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
22.499.6GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.015e-240At4g27020828810unknown proteinF:molecular_function unknown;P:unknown;C:vacuole;POC.G.S.X.
0.018e-136At5g54870835578unknown proteinF:molecular_function unknown;P:biological_process unknown;C:vacuole;POC.G.S.X.
0.018e-136At3g47460823900ATSMC2member of SMC subfamilyC.G.S.X.
0.018e-136At2g33420817906-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOC.G.S.X.
0.018e-136At1g75310843868AUL1F:heat shock protein binding;P:protein folding;C:unknown;MOBFPVAC.G.S.X.
0.013e+034At5g666316240924-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMC.G.S.X.
0.013e+034At5g15280831380pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POMFBAC.G.S.X.
0.023e+034At5g28750832987thylakoid assembly protein, putativeF:protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:protein secretion, protein transport;C:chloroplast thylakoid membrane, chloroplast envelope;BOPAC.G.S.X.
0.013e+034At4g27750828889ISI1 (IMPAIRED SUCROSE INDUCTION 1)A genetic locus involved in sugar sensing and coordinating carbohydrate synthesis and utilization by the whole plant. Lines carrying mutations in this gene shows restricted carbohydrate allocation to plant growth and seed set, elevated chlorophyll levels, and reduced sugar induction of starch biosynthesis.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e+034Glycine maxGmaAffx.77789.1.A1_atBI967361--3e+0At3g29033glycine-rich proteinC.G.S.X.
0.072e-1273Hordeum vulgareContig9647_atContig9647--2e-12At2g31530EMB2289 (EMBRYO DEFECTIVE 2289)C.G.S.X.
0.122e-21105Oryza sativaOs05g0397700AK067298.1-SecY protein family protein2e-21At2g31530EMB2289 (EMBRYO DEFECTIVE 2289)C.G.S.X.
0.191e-25119Populus trichocarpaPtpAffx.4160.1.S1_atDN497093SecY protein-5e-26At2g31530EMB2289 (EMBRYO DEFECTIVE 2289)C.G.S.X.
0.021e+132Triticum aestivumTaAffx.77597.1.S1_atCA745515--2e+0At1g02570unknown proteinC.G.S.X.
0.067e-1167Vitis vinifera1607402_atCD800723--8e-11At2g31530EMB2289 (EMBRYO DEFECTIVE 2289)C.G.S.X.
0.011e+034Zea maysZm.5405.1.A1_atAY109111.1hypothetical protein LOC100280064 /// glutamyl-tRNA-2e-16At3g25660glutamyl-tRNA(Gln) amidotransferase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0009306The controlled release of proteins from a cell or group of cells.
NGO:0009793The process whose specific outcome is the progression of the embryo over time, from zygote formation to the end of seed dormancy. An example of this process is found in Arabidopsis thaliana.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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