CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g31180

Gene name MYB14 (MYB DOMAIN PROTEIN 14)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.76 87.4 At2g31180 817674 MYB14 (MYB DOMAIN PROTEIN 14) Member of the R2R3 factor gene family. S.X. H.G.
0.68 82.2 At5g58180 835930 ATYKT62 member of YKT6 Gene Family S.X. H.G.
0.62 77.3 At3g14820 820711 carboxylesterase/ hydrolase, acting on ester bonds / lipase F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM S.X. H.G.
0.61 76.7 At5g17200 831584 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMVA S.X. H.G.
0.60 75.7 At2g18070 816319 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.60 75.7 At2g18200 816335 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P S.X. H.G.
0.57 73.8 At4g31280 829255 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.56 73.0 At1g69540 843289 AGL94 (AGAMOUS-LIKE 94) Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. S.X. H.G.
0.56 73.0 At4g03440 827920 ankyrin repeat family protein F:protein binding;P:unknown;C:unknown;MOPBFVA S.X. H.G.
0.56 73.0 At4g17660 827486 protein kinase, putative F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
173.7 100.0 E-MEXP-509-raw-cel-829148561
133.7 99.9 E-ATMX-31-raw-cel-1516948018
121.8 99.9 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
117.4 99.9 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
117.0 99.9 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
112.4 99.9 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
110.8 99.9 GSM226530 LCOLUMELLASB GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function
108.8 99.9 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
103.0 99.9 E-MEXP-509-raw-cel-829148525
96.4 99.9 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.45 4e-72 272 At1g06180 837127 ATMYB13 (MYB DOMAIN PROTEIN 13) member of MYB3R- and R2R3- type MYB- encoding genes C.G. S.X.
0.21 3e-23 109 At3g23250 821904 MYB15 (MYB DOMAIN PROTEIN 15) Member of the R2R3 factor gene family. C.G. S.X.
0.11 6e-9 61 At1g66230 842938 MYB20 (myb domain protein 20) Encodes a putative transcription factor (MYB20). C.G. S.X.
0.06 1e-7 57 At1g74650 843804 MYB31 (MYB DOMAIN PROTEIN 31) Member of the R2R3 factor gene family. C.G. S.X.
0.04 4e-7 56 At5g56110 835710 ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103) Encodes a member of the R2R3 MYB transcription factor gene family that is required for anther development by regulation tapetum development, callose dissolution and exine formation. It acts upstream of MS2. C.G. S.X.
0.09 2e-6 54 At5g12870 831127 MYB46 (MYB DOMAIN PROTEIN 46) Member of the R2R3 factor gene family. C.G. S.X.
0.09 6e-6 52 At3g47600 823914 ATMYB94 (MYB DOMAIN PROTEIN 94) Encodes a putative transcription factor (MYB94). C.G. S.X.
0.09 6e-6 52 At1g08810 837403 MYB60 (myb domain protein 60) putative transcription factor of the R2R3-MYB gene family. Transcript increases under conditions that promote stomatal opening (white and blue light, abi1-1 mutation) and decreases under conditions that trigger stomatal closure (ABA, desiccation, darkness), with the exception of elevated CO2. Expressed exclusively in guard cells of all tissues. It is required for light-induced opening of stomata. Mutant shows reduced stomatal aperture which helps to limit water loss during drought. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 6e-16 85 Glycine max GmaAffx.57525.1.S1_x_at AW831457 GmMYB29 protein - 3e-16 At2g31180 MYB14 (MYB DOMAIN PROTEIN 14) C.G. S.X.
0.03 2e-1 36 Hordeum vulgare HV_CEa0015H07r2_s_at HV_CEa0015H07r2 - - 5e-2 At3g25140 QUA1 (QUASIMODO 1) C.G. S.X.
0.02 7e-1 36 Oryza sativa Os06g0221000 9634.m05035 - P-type R2R3 Myb protein (Fragment) 1e-16 At5g10280 ATMYB92 (MYB DOMAIN PROTEIN 92) C.G. S.X.
0.28 2e-12 73 Populus trichocarpa PtpAffx.224226.1.S1_at pmrna42588 hypothetical protein - 2e-19 At1g06180 ATMYB13 (MYB DOMAIN PROTEIN 13) C.G. S.X.
0.04 1e-1 38 Triticum aestivum Ta.19523.1.S1_at CA652976 - - 4e+0 At4g35430 unknown protein C.G. S.X.
0.16 3e-8 57 Vitis vinifera 1621784_at AB073016.1 - - 2e-7 At2g31180 MYB14 (MYB DOMAIN PROTEIN 14) C.G. S.X.
0.04 6e-1 34 Zea mays Zm.13246.1.S1_at AY135019.1 PL transcription factor - 5e-7 At3g13540 ATMYB5 (MYB DOMAIN PROTEIN 5) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009723 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethylene (ethene) stimulus.
X GO:0009651 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
X GO:0009733 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
X GO:0009751 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.
X GO:0009753 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.
C GO:0006355 Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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