Gene omics information

Query gene ID At2g30860
Gene name ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g30860817636ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
0.4457.2At1g04410839527malate dehydrogenase, cytosolic, putativeF:in 6 functions;P:response to cadmium ion, response to salt stress;C:in 7 components;BOMPFAS.X.H.G.
0.4457.2At1g13440837904GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2)F:NAD or NADH binding, glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, binding, catalytic activity, glyceraldehyde-3-phosphate dehydrogenase activity;P:response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis;C:in 8 components;BOPFMAS.X.H.G.
0.3846.7At4g14880827145OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1)Encodes a cytosolic isoform of cytosolic O-acetylserine(thiol)lyase, a key enzyme in cysteine biosynthesis and for the fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Gene expression is predominant in the root cortex and the xylem parenchyma. Gene expression is induced in leave, stems and roots by high salt and heavy metal stresses, mediated by ABA.S.X.H.G.
0.2930.3At4g13430826975IIL1 (ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1)F:4 iron, 4 sulfur cluster binding, lyase activity, hydro-lyase activity;P:response to cadmium ion, metabolic process;C:chloroplast stroma, chloroplast;OBFMAPS.X.H.G.
0.2930.3At3g12290820409tetrahydrofolate dehydrogenase/cyclohydrolase, putativeF:binding, catalytic activity;P:folic acid and derivative biosynthetic process, metabolic process;C:chloroplast;OBMFPAS.X.H.G.
0.2217.5At3g55440824710TPI (TRIOSEPHOSPHATE ISOMERASE)Encodes triosephosphate isomerase.S.X.H.G.
0.1811.4At5g43940834417HOT5 (sensitive to hot temperatures 5)Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Is required for the acclimation of plants to high temperature and for fertility.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.299.2GSM184498Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
9.499.1GSM184495Endodermis&Pericycle root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
8.799.0GSM258003LMPC-derived phloem_2GSE10247Transcriptome analysis of the Arabidopsis phloem
8.799.0GSM184494Endodermis&Pericycle root cells 2hr KCl control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
8.399.0GSM184500Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
8.299.0GSM184501Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
7.198.8E-MEXP-173-raw-cel-357965520
6.698.7GSM258002LMPC-derived phloem_1GSE10247Transcriptome analysis of the Arabidopsis phloem
6.498.6GSM184502Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
6.198.5GSM157361Ulker_2-4_WRKY-KO-30-Pst-DC3000_Rep1_ATH1GSE6829Group II-A WRKY transcription factors and early leaf senescence
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.656e-58224At2g30870817637GSTF10 (HALIANA GLUTATHIONE S-TRANSFERASE PHI 10)early dehydration-induced gene ERD13 homologous to tobacco and maize glutathione S-transferases. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002)C.G.S.X.
0.013e-136At4g35830829737aconitate hydratase, cytoplasmic / citrate hydro-lyase / aconitase (ACO)F:aconitate hydratase activity, 4 iron, 4 sulfur cluster binding;P:response to salt stress;C:mitochondrion, apoplast, plasma membrane, vacuole;OBFMAPC.G.S.X.
0.011e+034At5g57110835815ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.C.G.S.X.
0.021e+034At5g53180835399PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2)Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination.C.G.S.X.
0.031e+034At4g02520827931ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2)Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.C.G.S.X.
0.031e+034At2g02930814822ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3)Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).C.G.S.X.
0.011e+034At1g67530843074armadillo/beta-catenin repeat family protein / U-box domain-containing family proteinF:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;PMOFBVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-240Glycine maxGma.7226.4.S1_a_atAW202090glutathione S-transferase GST 22-2e-2At2g30860ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)C.G.S.X.
0.054e-857Hordeum vulgareContig6238_s_atContig6238--1e-7At2g30860ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)C.G.S.X.
0.053e+034Oryza sativaOs01g0371200AK058900.1-Glutathione S-transferase 1 (EC 2.5.1.18) (GSTclass-phi)2e+0At2g30860ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)C.G.S.X.
0.051e-138Populus trichocarpaPtpAffx.214612.1.S1_atpmrna28393hypothetical protein-2e-2At2g30860ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)C.G.S.X.
0.033e-136Triticum aestivumTaAffx.55873.1.S1_atCA660038--2e-1At2g30860ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)C.G.S.X.
0.086e-340Vitis vinifera1610406_atAY156050.1glutathione S-transferase 3-1e-2At2g30860ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)C.G.S.X.
0.022e+032Zea maysZm.9319.1.A1_atCF627080hypothetical protein LOC100216855-2e+0At5g10000ATFD4 (ferredoxin 4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0042742Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
XGO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
SGO:0009407The chemical reactions and pathways resulting in the breakdown of toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00480Link to KEGG PATHWAYGlutathione metabolism
00980Link to KEGG PATHWAYMetabolism of xenobiotics by cytochrome P450
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