CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g30750

Gene name CYP71A12 (cytochrome P450, family 71, subfamily A, polypeptide 12)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.60 75.7 At2g30750 817626 CYP71A12 (cytochrome P450, family 71, subfamily A, polypeptide 12) putative cytochrome P450 S.X. H.G.
0.44 57.2 At4g31970 829327 CYP82C2 member of CYP82C S.X. H.G.
0.29 30.3 At1g26410 839183 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:cellular_component unknown;FBPOAM S.X. H.G.
0.17 10.2 At1g26380 839180 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM S.X. H.G.
0.09 2.8 At1g69920 843328 ATGSTU12 (GLUTATHIONE S-TRANSFERASE TAU 12) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). S.X. H.G.
0.03 0.6 At1g26390 839181 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAM S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
300.1 100.0 E-MEXP-1784-raw-cel-1661573005
268.1 100.0 E-MEXP-1784-raw-cel-1661573018
257.2 100.0 E-MEXP-1784-raw-cel-1661572992
252.7 100.0 GSM131377 AtGen_6-5521_Genotoxicstress-Roots-12.0h_Rep1 GSE5625 AtGenExpress: Stress Treatments (Genotoxic stress)
105.8 99.9 GSM142837 MG001_ATH1_A16-Torres-6N1 GSE6176 Impact of Type III effectors on plant defense responses
105.2 99.9 GSM13784 Cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
102.9 99.9 GSM13780 Cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
100.2 99.9 GSM13779 Dexamethasone plus cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
83.6 99.9 E-MEXP-711-raw-cel-1563002902
80.5 99.9 GSM290759 root - 01% oxygen - 48h - F GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.90 0 1863 At1g11610 837705 CYP71A18 putative cytochrome P450 C.G. S.X.
0.90 0 1859 At2g30770 817628 CYP71A13 (cytochrome P450, family 71, subfamily A, polypeptide 13) putative cytochrome P450 C.G. S.X.
0.39 3e-31 137 At5g24950 832565 CYP71A15 putative cytochrome P450 C.G. S.X.
0.29 4e-27 123 At5g42590 834266 CYP71A16 putative cytochrome P450 C.G. S.X.
0.42 2e-26 121 At5g24960 832566 CYP71A14 putative cytochrome P450 C.G. S.X.
0.25 7e-26 119 At4g20240 827771 CYP71A27 putative cytochrome P450 C.G. S.X.
0.30 2e-23 111 At4g13290 826959 CYP71A19 putative cytochrome P450 C.G. S.X.
0.34 6e-17 89 At4g13310 826961 CYP71A20 putative cytochrome P450 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+0 36 Glycine max GmaAffx.45106.1.S1_s_at BG041911 - - 7e-14 At2g20080 unknown protein C.G. S.X.
0.02 1e+0 34 Hordeum vulgare HVSMEl0005B19r2_at HVSMEl0005B19r2 - - 4e+0 At5g66607 unknown protein C.G. S.X.
0.02 2e+0 36 Oryza sativa OsAffx.20967.1.S1_at - - - 0 C.G. S.X.
0.02 7e-2 40 Populus trichocarpa PtpAffx.160184.1.A1_at CV243514 - - 3e-1 At5g20180 ribosomal protein L36 family protein C.G. S.X.
0.02 3e+0 34 Triticum aestivum Ta.25832.1.A1_at CD453384 - - 4e-4 At3g32047 electron carrier/ heme binding / iron ion binding / monooxygenase C.G. S.X.
0.03 4e-3 42 Vitis vinifera 1613695_at CA815439 hypothetical LOC100241660 - 1e-3 At1g11610 CYP71A18 C.G. S.X.
0.02 5e+0 32 Zea mays ZmAffx.378.1.A1_at AI673943 - - 1e+1 At5g54360 zinc finger (C2H2 type) family protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009617 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00347 Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
00903 Limonene and pinene degradation
00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
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