Gene omics information

Query gene ID At2g30290
Gene name vacuolar sorting receptor, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8190.4At2g30290817579vacuolar sorting receptor, putativeF:calcium ion binding;P:protein targeting to vacuole;C:integral to plasma membrane, Golgi transport complex;MOPBAS.X.H.G.
0.9897.8At3g17630821030ATCHX19 (CATION/H+ EXCHANGER 19)member of Putative Na+/H+ antiporter familyS.X.H.G.
0.9897.8At4g11030826704long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putativeF:catalytic activity;P:fatty acid biosynthetic process;C:unknown;BOMFPAVS.X.H.G.
0.9797.6At1g07850837300transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:N-terminal protein myristoylation;C:chloroplast;MPFOS.X.H.G.
0.9797.6At1g72960843627root hair defective 3 GTP-binding (RHD3) family proteinF:nucleotide binding;P:unknown;C:cellular_component unknown;OFPMBS.X.H.G.
0.9797.6At2g16120816109mannitol transporter, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMOPAVS.X.H.G.
0.9797.6At4g10440826636dehydration-responsive family proteinF:unknown;P:unknown;C:unknown;PBOAS.X.H.G.
0.9697.3At3g17720821040pyridoxal-dependent decarboxylase family proteinF:pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity, glutamate decarboxylase activity;P:amino acid metabolic process, carboxylic acid metabolic process, glutamate metabolic process;C:unknown;BFPAOMS.X.H.G.
0.9597.0At2g16750816176protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.9597.0At2g07560815329AHA6 (Arabidopsis H(+)-ATPase 6)F:ATPase activity;P:cation transport, metabolic process, ATP biosynthetic process;C:plasma membrane, membrane;BMOFPAVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
407.6100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
161.299.9GSM142736DH001_ATH1_A3-TCP1GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
135.499.9GSM106825opr3_0 hr_Rep1GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
130.299.9GSM106923opr3_OPDA_2 hrs_Rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
122.799.9GSM106907opr3_JA_0.5 hr_Rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
122.799.9GSM106913opr3_JA_8 hrs_Rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
119.799.9GSM131593ATGE_36_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
116.499.9GSM106912opr3_JA 8hrs_Rep1GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
112.099.9GSM131591ATGE_36_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
109.999.9GSM106827opr3_0 hr_Rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.247e-1479At3g52850824451VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1)Encodes the Vacuolar Sorting Receptor-1 (VSR-1)/Epidermal Growth Factor Receptor-like protein1(VSR-1/ATELP1). Binds vacuolar targeting signals. Involved in sorting seed storage proteins into vacuoles.C.G.S.X.
0.102e-757At2g14720815960VSR-2encodes a vacuolar sorting receptorC.G.S.X.
0.132e-757At2g14740815962ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3)F:calcium ion binding;P:intracellular protein transport, protein targeting to vacuole;C:integral to plasma membrane, Golgi transport complex, membrane;MOPBFAC.G.S.X.
0.034e-344At4g20110827757vacuolar sorting receptor, putativeF:calcium ion binding;P:intracellular protein transport, N-terminal protein myristoylation, protein targeting to vacuole;C:trans-Golgi network, integral to plasma membrane, Golgi transport complex, membrane;MOPBFAC.G.S.X.
0.071e-242At1g30900839974vacuolar sorting receptor, putativeF:calcium ion binding;P:protein targeting to vacuole;C:integral to plasma membrane, Golgi transport complex;MOPBFAC.G.S.X.
0.016e-240At4g28760828997unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.228e-30133Glycine maxGma.2300.2.S1_atBM887591--1e-18At3g52850VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1)C.G.S.X.
0.093e-240Hordeum vulgareContig8635_atContig8635--6e-10At2g14720VSR-2C.G.S.X.
0.112e-656Oryza sativaOs03g0335300AK111847.1-PV726e-18At3g52850VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1)C.G.S.X.
0.162e-1275Populus trichocarpaPtpAffx.32547.1.A1_atCV230526hypothetical protein-8e-44At3g52850VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1)C.G.S.X.
0.087e-550Triticum aestivumTaAffx.4083.1.S1_atCA599327--8e-5At2g14720VSR-2C.G.S.X.
0.068e-1167Vitis vinifera1622462_atCB916510hypothetical protein LOC100265163-4e-23At2g14740ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3)C.G.S.X.
0.123e-859Zea maysZm.5530.1.A1_atAI629939hypothetical protein LOC100191845-1e-18At2g14740ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0006623The process of directing proteins towards the vacuole, usually using signals contained within the protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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