Gene omics information

Query gene ID At2g30250
Gene name WRKY25
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.1710.2At2g30250817575WRKY25member of WRKY Transcription Factor; Group I. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress.S.X.H.G.
0.5065.3At4g33050829442EDA39 (embryo sac development arrest 39)F:calmodulin binding;P:polar nucleus fusion, response to chitin;C:cellular_component unknown;PFOS.X.H.G.
0.3643.6At1g55450841992embryo-abundant protein-relatedF:methyltransferase activity;P:response to salt stress;C:unknown;BPFMOAS.X.H.G.
0.3338.1At3g52400824405SYP122 (SYNTAXIN OF PLANTS 122)syntaxin protein, involved in the negative regulation of defense pathways such as programmed cell death, salicylic acid signalling pathway, jasmonic acid signalling pathwayS.X.H.G.
0.3338.1At4g34150829563C2 domain-containing proteinF:unknown;P:response to cold;C:unknown;MPFOBVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
150.799.9GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
145.299.9GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
130.999.9GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
117.899.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
115.299.9GSM131329AtGen_6-3621_Saltstress-Roots-24.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
92.499.9GSM131330AtGen_6-3622_Saltstress-Roots-24.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
88.399.9E-MEXP-807-raw-cel-1173272948
86.399.9GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
56.899.8GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
46.799.8GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.143e-21103At5g07100830601WRKY26Encodes WRKY DNA-binding protein 26 (WRKY26).C.G.S.X.
0.041e-1171At1g13960837956WRKY4Encodes WRKY DNA-binding protein 4 (WRKY4).C.G.S.X.
0.062e-1067At5g56270835726WRKY2WRKY transcription factor 2C.G.S.X.
0.062e-1067At1g55600842009WRKY10 (WRKY DNA-BINDING PROTEIN 10)member of WRKY Transcription Factor; Group I. It has WRKY domain at its N terminal end and zinc-finger like motif.C.G.S.X.
0.042e-757At2g03340814863WRKY3Encodes WRKY DNA-binding protein 3 (WRKY3).C.G.S.X.
0.051e-552At3g01080821213WRKY58member of WRKY Transcription Factor; Group IC.G.S.X.
0.064e-550At4g26440828750WRKY34 (WRKY DNA-BINDING PROTEIN 34)member of WRKY Transcription Factor; Group IC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.132e-1791Glycine maxGmaAffx.6438.3.S1_s_atBE611653WRKY19 protein /// WRKY62 protein-3e-26At5g07100WRKY26C.G.S.X.
0.061e-344Hordeum vulgareContig12033_atContig12033--1e-11At1g13960WRKY4C.G.S.X.
0.065e-344Oryza sativaOs07g0596900AY341847.1-WRKY transcription factor 309e-10At2g03340WRKY3C.G.S.X.
0.094e-1273Populus trichocarpaPtpAffx.213689.1.S1_atpmrna26724hypothetical protein-5e-33At2g38470WRKY33C.G.S.X.
0.064e-859Triticum aestivumTa.13236.1.S1_atBM136267SUSIBA2-like protein-2e-18At4g26640WRKY20C.G.S.X.
0.091e-1789Vitis vinifera1610064_atCB341653similar to DNA-binding protein-3e-19At2g38470WRKY33C.G.S.X.
0.021e+034Zea maysZm.4998.1.A1_atAI600277acetyltransferase, GNAT family protein-3e+0At1g19910AVA-P2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006970A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.
XGO:0009409A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
XGO:0009651A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
CGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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