CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g30040

Gene name MAPKKK14

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.67 81.6 At2g30040 817555 MAPKKK14 member of MEKK subfamily S.X. H.G.
0.89 94.6 At4g34410 829591 RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. S.X. H.G.
0.80 89.8 At2g05050 3767735 catalytic F:catalytic activity;P:biological_process unknown;C:cellular_component unknown S.X. H.G.
0.61 76.7 At3g61190 825291 BAP1 (BON ASSOCIATION PROTEIN 1) Encodes a protein with a C2 domain that binds to BON1 in yeast two hybrid analyses. Its ability to bind to phospholipids is enhanced by calcium ions. Involved in maintaining cell homeostasis. S.X. H.G.
0.57 73.8 At1g80840 844423 WRKY40 Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
235.0 100.0 E-MEXP-807-raw-cel-1173273060
188.4 100.0 E-MEXP-807-raw-cel-1173273170
174.8 100.0 E-MEXP-807-raw-cel-1173273252
159.3 99.9 E-MEXP-807-raw-cel-1173273223
157.4 99.9 E-MEXP-807-raw-cel-1173273116
156.0 99.9 E-MEXP-807-raw-cel-1173273144
147.2 99.9 E-MEXP-807-raw-cel-1173273196
147.1 99.9 E-MEXP-807-raw-cel-1173273088
116.8 99.9 GSM184499 Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
99.2 99.9 GSM218586 Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.25 7e-38 159 At1g07150 837226 MAPKKK13 member of MEKK subfamily C.G. S.X.
0.02 3e-3 44 At5g38620 833852 MADS-box protein (AGL73) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOF C.G. S.X.
0.02 3e-3 44 At2g04690 815012 cellular repressor of E1A-stimulated genes (CREG) family F:FMN binding;P:biological_process unknown;C:vacuole;MBOPF C.G. S.X.
0.01 1e-2 42 At5g48360 834889 formin homology 2 domain-containing protein / FH2 domain-containing protein F:actin binding;P:cellular component organization, actin cytoskeleton organization;C:unknown;MPOFVBA C.G. S.X.
0.02 1e-2 42 At5g19340 832054 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMFBV C.G. S.X.
0.02 1e-2 42 At5g56340 835734 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB C.G. S.X.
0.01 1e-2 42 At5g16020 831459 stress protein-related F:molecular_function unknown;P:unknown;C:endomembrane system;BOAPF C.G. S.X.
0.02 1e-2 42 At4g00905 827986 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMO C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-2 42 Glycine max GmaAffx.87798.1.S1_at AW756084 cyclin d3 - 8e-2 At5g19340 unknown protein C.G. S.X.
0.02 3e-1 36 Hordeum vulgare HVSMEb0008B06r2_at HVSMEb0008B06r2 - - 8e-2 At2g30040 MAPKKK14 C.G. S.X.
0.03 6e-3 44 Oryza sativa Os.10528.1.S1_s_at - - - 0 C.G. S.X.
0.14 5e-24 113 Populus trichocarpa PtpAffx.204797.1.S1_at pmrna9452 hypothetical protein - 3e-24 At2g30040 MAPKKK14 C.G. S.X.
0.02 7e-1 36 Triticum aestivum TaAffx.27063.1.S1_at CA681704 - - 7e-1 At1g70770 unknown protein C.G. S.X.
0.02 5e-2 38 Vitis vinifera 1608002_s_at CF209324 hypothetical protein LOC100259302 - 4e+0 At3g13229 unknown protein C.G. S.X.
0.02 1e+0 34 Zea mays Zm.9422.1.A1_at BM268752 hypothetical protein LOC100279301 - 7e-2 At5g07600 oleosin / glycine-rich protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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