Gene omics information

Query gene ID At2g29690
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6176.7At2g29690817519ASA2 (ANTHRANILATE SYNTHASE 2)Encode a functional anthranilate synthase protein. Expressed at a constitutive basal level. Expression was not induced by wounding nor bacterial pathogen infiltration. Involved in aromatic amino acid biosynthesis.S.X.H.G.
0.2726.2At3g07440819932unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.146.8At5g48840834942PANC (ARABIDOPSIS HOMOLOG OF BACTERIAL PANC)Encodes a pantothenate synthetase that appears to be located in the cytosol. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis. Analysis of the catalytic properties of this enzyme indicate that it might be able to synthesize adequate amounts of pantothenate even in the presence of low levels of pantoate.S.X.H.G.
0.051.1At2g13440815830glucose-inhibited division family A proteinF:FAD binding;P:tRNA processing, tRNA wobble uridine modification;C:chloroplast;OBMFPAS.X.H.G.
0.010.2At1g09830837515phosphoribosylamine--glycine ligase (PUR2)glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamideS.X.H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
102.299.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
85.499.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
82.299.9GSM133765Lindsey_1-17_torpedo-cotyledon_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.183e-1997At5g05730830457ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1)ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots.C.G.S.X.
0.172e-757At3g55870824753anthranilate synthase, alpha subunit, putativeF:oxo-acid-lyase activity, anthranilate synthase activity;P:tryptophan biosynthetic process, biosynthetic process;C:endomembrane system;BOFAPMC.G.S.X.
0.012e-138At3g13380820538BRL3 (BRI1-LIKE 3)Similar to BRI, brassinosteroid receptor protein.C.G.S.X.
0.019e-136At4g27860828899integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:integral to membrane;POMBFC.G.S.X.
0.019e-136At4g21070827854ATBRCA1Encodes AtBRCA1, an ortholog of the human breast cancer susceptibility gene 1. Contains one N-terminal RING finger, two C-terminal BRCT and the p300/CBP interacting domain. Strongly induced by gamma rays, consistent with a putative role in DNA repair and in cell cycle control.C.G.S.X.
0.019e-136At3g53380824506lectin protein kinase family proteinF:carbohydrate binding, kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.019e-136At2g26450817185pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMOC.G.S.X.
0.014e+034At5g19020832021pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POMFC.G.S.X.
0.014e+034At5g27670832829HTA7 (HISTONE H2A 7)Encodes HTA7, a histone H2A protein.C.G.S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.209e-859Glycine maxGma.13056.1.S1_atBG651726--2e-8At2g29690ASA2 (ANTHRANILATE SYNTHASE 2)C.G.S.X.
0.102e-1893Hordeum vulgareContig11179_atContig11179--5e-8At5g05730ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1)C.G.S.X.
0.174e-1791Oryza sativaOs03g0264400AK069180.1-Anthranilate synthase alpha 2 subunit4e-16At2g29690ASA2 (ANTHRANILATE SYNTHASE 2)C.G.S.X.
0.452e-24115Populus trichocarpaPtpAffx.149907.1.S1_atDN486564anthranilate synthase, alpha subunit 2-9e-25At2g29690ASA2 (ANTHRANILATE SYNTHASE 2)C.G.S.X.
0.095e-21103Triticum aestivumTa.4287.1.S1_atBQ161159--2e-8At3g55870anthranilate synthase, alpha subunit, putativeC.G.S.X.
0.011e+034Vitis vinifera1610634_atCF517455hypothetical protein LOC100262313-1e-3At1g02700unknown proteinC.G.S.X.
0.192e-1893Zea maysZm.14469.1.A1_atAY104124.1anthranilate synthase alpha-6e-18At2g29690ASA2 (ANTHRANILATE SYNTHASE 2)C.G.S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009073The chemical reactions and pathways resulting in the formation of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
SGO:0000162The chemical reactions and pathways resulting in the formation of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid; tryptophan is synthesized from chorismate via anthranilate.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00017Link to KaPPA-View 4Aromatic amino acid biosynthesis

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

00400Link to KEGG PATHWAYPhenylalanine, tyrosine and tryptophan biosynthesis
01061Link to KEGG PATHWAYBiosynthesis of phenylpropanoids
01063Link to KEGG PATHWAYBiosynthesis of alkaloids derived from shikimate pathway
01070Link to KEGG PATHWAYBiosynthesis of plant hormones
01100Link to KEGG PATHWAYMetabolic pathways
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage