Gene omics information

Query gene ID At2g29660
Gene name zinc finger (C2H2 type) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4659.8At2g29660817516zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:anchored to membrane;PFOS.X.H.G.
0.6075.7At4g14465827093DNA-binding protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMS.X.H.G.
0.5065.3At1g27030839592unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPS.X.H.G.
0.3235.7At2g40900818687nodulin MtN21 family proteinF:unknown;P:unknown;C:membrane;BOPAMS.X.H.G.
0.2726.2At3g20015821540aspartic-type endopeptidaseF:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PMFOS.X.H.G.
0.2115.8At1g18880838469proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport;C:membrane;PMBFOS.X.H.G.
0.1811.4At3g59690825138IQD13 (IQ-domain 13)F:calmodulin binding;P:unknown;C:plasma membrane;POMVFBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
55.099.8GSM67087Arabidopsis_Stigma03GSE3056Arabidopsis Pollination Study
50.299.8GSM142624MC002_ATH1_A1.2-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
49.099.8GSM67086Arabidopsis_Stigma02GSE3056Arabidopsis Pollination Study
47.999.8GSM142625MC002_ATH1_A1.3-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
46.599.8GSM157306Gan_1-3_wildtype-nitrate-minus(WNM)_Rep2_ATH1GSE6824Identification of genes involved in nutritional regulation of root architecture
45.699.8GSM133131S1500_0H_AGSE5688AtGenExpress: Response to sulfate limitation
43.499.8GSM133141S1500_8H_AGSE5688AtGenExpress: Response to sulfate limitation
40.499.8GSM131203AtGen_D-37_3-BL_REP3_ATH1GSE5617AtGenExpress: Light treatments
39.699.8GSM142662MB002_ATH1_A2-Eland-ch2GSE6153Identification of genes involved in secondary cell wall development in the hypocotyls of short day grown Arabidopsis
37.799.7GSM142636MC002_ATH1_A5.2-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.064e-550At1g62520842549unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFOBC.G.S.X.
0.031e-138At5g19230832043unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PC.G.S.X.
0.031e-138At4g02465827982unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownC.G.S.X.
0.011e-138At4g28490828967HAE (HAESA)member of Receptor kinase-like protein familyC.G.S.X.
0.031e-138At1g10720837615BSD domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFVBC.G.S.X.
0.016e-136At5g48410834896ATGLR1.3member of Putative ligand-gated ion channel subunit familyC.G.S.X.
0.036e-136At5g18010831668auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POC.G.S.X.
0.016e-136At5g48400834895ATGLR1.2member of Putative ligand-gated ion channel subunit familyC.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.131e-1481Glycine maxGmaAffx.12923.1.S1_atBU763037--4e-15At2g29660zinc finger (C2H2 type) family proteinC.G.S.X.
0.021e+034Hordeum vulgareContig24783_atContig24783--3e-2At5g15460MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2)C.G.S.X.
0.023e-138Oryza sativaOsAffx.26902.1.S1_at---0C.G.S.X.
0.184e-1583Populus trichocarpaPtpAffx.22915.1.A1_atCV227207hypothetical protein-2e-15At2g29660zinc finger (C2H2 type) family proteinC.G.S.X.
0.032e+034Triticum aestivumTaAffx.96285.1.A1_atBE418164--9e-1At5g54540-C.G.S.X.
0.037e-134Vitis vinifera1614489_atCB974585--9e-6At2g45960PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B)C.G.S.X.
0.026e-238Zea maysZm.17940.1.A1_atBM269501hypothetical protein LOC100191149-2e-12At4g33380unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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