CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g29450

Gene name ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.44 57.2 At2g29450 817494 ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5) Encodes a member of the TAU glutathione S-transferase gene family. Gene expression is induced by exposure to auxin, pathogen and herbicides. Naming convention according to Wagner et al. (2002) S.X. H.G.
0.53 68.6 At1g44350 841026 ILL6 encodes a protein similar to IAA amino acid conjugate hydrolase. S.X. H.G.
0.50 65.3 At3g47960 823951 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:plasma membrane, membrane;PMBFO S.X. H.G.
0.50 65.3 At5g54170 835505 - F:molecular_function unknown;P:response to wounding;C:unknown;MPO S.X. H.G.
0.29 30.3 At5g42650 834273 AOS (ALLENE OXIDE SYNTHASE) Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
53.5 99.8 E-MEXP-1443-raw-cel-1581869921
48.0 99.8 E-MEXP-1443-raw-cel-1581869863
44.0 99.8 GSM204069 protoplast_hypoxia_rep1 GSE8248 Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
42.6 99.8 GSM152145 siz1-3 drought 3 GSE6583 Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
41.1 99.8 GSM152143 siz1-3 drought 2 GSE6583 Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
40.6 99.8 E-ATMX-19-raw-cel-1375547479
40.2 99.8 E-MEXP-1443-raw-cel-1581869632
37.0 99.7 GSM272991 flu over-tAPX 14-2, biological rep1 GSE10812 Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
36.3 99.7 E-MEXP-1443-raw-cel-1581869688
33.9 99.7 GSM152141 siz1-3 drought 1 GSE6583 Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.83 6e-126 450 At2g29440 817493 ATGSTU6 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 6) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
0.54 5e-28 125 At2g29490 817498 ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
0.22 3e-14 79 At2g29480 817497 ATGSTU2 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 2) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
0.37 2e-9 63 At2g29460 817495 ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
0.19 2e-9 63 At2g29420 817491 ATGSTU7 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 7) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid. C.G. S.X.
0.05 2e-8 59 At1g53680 841805 ATGSTU28 (GLUTATHIONE S-TRANSFERASE TAU 28) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
0.05 3e-4 46 At5g62480 836368 ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
0.08 3e-4 46 At3g09270 820083 ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
0.15 3e-4 46 At2g29470 817496 ATGSTU3 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 3) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 1e-10 67 Glycine max Gma.10032.1.S1_at CD418000 - - 1e-10 At2g29450 ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5) C.G. S.X.
0.04 6e-1 34 Hordeum vulgare HU12O04u_s_at HU12O04u - - 9e-1 At2g29450 ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5) C.G. S.X.
0.04 3e+0 34 Oryza sativa OsAffx.31141.1.A1_at - - - 0 C.G. S.X.
0.05 5e-4 46 Populus trichocarpa PtpAffx.20731.1.A1_at CX653973 - - 5e-7 At2g29490 ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1) C.G. S.X.
0.07 1e+0 34 Triticum aestivum TaAffx.110629.2.S1_x_at CA678087 - - 9e-1 At2g29450 ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5) C.G. S.X.
0.07 2e-3 42 Vitis vinifera 1613204_at AF501625.1 glutathione-S-transferase /// hypothetical protein LOC100249549 /// hypothetical LOC100267917 - 4e-8 At1g17180 ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25) C.G. S.X.
0.03 6e-1 34 Zea mays Zm.561.1.A1_at AF244701.1 glutathione transferase23 - 5e-1 At3g43800 ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0006979 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
S GO:0009407 The chemical reactions and pathways resulting in the breakdown of toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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