Gene omics information

Query gene ID At2g28930
Gene name APK1B
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g28930817442APK1BF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MPOBFVAS.X.H.G.
0.3338.1At2g26770817218plectin-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVS.X.H.G.
0.2930.3At3g13690820578protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.2522.6At3g61150825287HDG1 (HOMEODOMAIN GLABROUS 1)Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family.S.X.H.G.
0.2420.7At3g17750821043protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cytosol, plasma membrane;MOPFBVAS.X.H.G.
0.2217.5At5g50860835158protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MPOFBVAS.X.H.G.
0.2217.5At5g60710836192zinc finger (C3HC4-type RING finger) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:N-terminal protein myristoylation;C:plasma membrane;BMOPFAS.X.H.G.
0.2115.8At2g23460816878XLG1 (EXTRA-LARGE G-PROTEIN 1)encodes a novel G-alpha protein that shares similarity to plant, yeast, and animal G-alpha proteins at the C-terminus. It contains an N-terminus that is as large as the C-terminus, is a member of a small family, and is expressed in all tissues examined, including roots, leaves, stems, flowers, and fruits.S.X.H.G.
0.2014.4At4g32551829390LUG (LEUNIG)LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.S.X.H.G.
0.2014.4At4g15415827211ATB' GAMMAB' regulatory subunit of PP2A (AtB'gamma)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
86.499.9E-MEXP-1443-raw-cel-1581869515
77.399.9E-MEXP-1443-raw-cel-1581869745
54.999.8E-MEXP-1443-raw-cel-1581869803
39.399.8GSM142851MG001_ATH1_A4-Torres-2N1GSE6176Impact of Type III effectors on plant defense responses
33.899.7E-MEXP-807-raw-cel-1173272948
30.899.7GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responses
30.799.7GSM242959Steroid day 3 (day3D1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
28.399.7GSM142853MG001_ATH1_A6-Torres-2N6GSE6176Impact of Type III effectors on plant defense responses
28.099.7GSM242955Steroid day 1 (day1D1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
25.899.7GSM242957Mock day 3 (day3E1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.680670At1g07570837271APK1AProtein kinase capable of phosphorylating tyrosine, serine, and threonine residuesC.G.S.X.
0.235e-23109At5g02290831880NAKEncodes a candidate protein kinase NAK that is similar to the oncogenes met and abl.C.G.S.X.
0.102e-1687At2g05940815147protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.218e-1685At2g39660818549BIK1 (BOTRYTIS-INDUCED KINASE1)Encodes a plasma membrane-localized ser/thr protein kinase that is a crucial component of host response signaling required to activate the resistance responses to Botrytis and A. brassicicola infection. It is likely a negative regulator of salicylic acid accumulation and basal defense against virulent bacterial pathogens.C.G.S.X.
0.081e-1171At5g35580833523ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.203e-25117Glycine maxGma.3111.2.S1_a_atBQ740743--5e-27At1g07570APK1AC.G.S.X.
0.179e-1477Hordeum vulgareContig6247_atContig6247--1e-42At1g07570APK1AC.G.S.X.
0.194e-1997Oryza sativaOs01g0973500AK069546.1-Protein kinase APK1A (EC 2.7.1.-)7e-48At1g07570APK1AC.G.S.X.
0.207e-1789Populus trichocarpaPtpAffx.24776.2.A1_a_atCV269543hypothetical protein-7e-21At1g07570APK1AC.G.S.X.
0.136e-26119Triticum aestivumTa.5275.1.A1_atAJ615682--9e-26At2g28930APK1BC.G.S.X.
0.022e-136Vitis vinifera1618005_atCD009831--1e-3At1g48220ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseC.G.S.X.
0.183e-1995Zea maysZm.12080.1.A1_atBM348988protein kinase APK1A-1e-18At2g28930APK1BC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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