Gene omics information

Query gene ID At2g28755
Gene name UDP-D-glucuronate carboxy-lyase-related
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5570.6At2g28755817425UDP-D-glucuronate carboxy-lyase-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPMFAS.X.H.G.
0.7586.9At4g08140826362-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPS.X.H.G.
0.6781.6At1g54430841885transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5773.8At3g31910822931-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOMFS.X.H.G.
0.4761.2At5g288803770842transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
711.7100.0GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
393.9100.0GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
393.2100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
225.4100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
198.8100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
167.6100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
163.499.9GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
155.099.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
153.899.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
152.199.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.249e-48188At2g28760817426NAD-dependent epimerase/dehydratase family proteinF:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, nucleotide-sugar metabolic process, metabolic process;C:plasma membrane;OBPMAFVC.G.S.X.
0.169e-1165At5g59290836047UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE 3)Encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be cytosolic by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.C.G.S.X.
0.052e-238At3g46440823794UXS5encodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.C.G.S.X.
0.021e+032At5g02700831837F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PFC.G.S.X.
0.011e+032At4g29990829122light repressible receptor protein kinaseF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.137e-340Glycine maxGma.16417.1.S1_atBE822822--5e-21At5g59290UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE 3)C.G.S.X.
0.056e-132Hordeum vulgareHF04I11r_s_atHF04I11r--9e-1At3g20340-C.G.S.X.
0.042e+032Oryza sativaOs03g0152400CR279600-4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)(4-coumaroyl-CoA synthase 1) (Clone 4CL14) (Fragment)6e-12At4g051604-coumarate--CoA ligase, putative / 4-coumaroyl-CoA synthase, putativeC.G.S.X.
0.083e-238Populus trichocarpaPtpAffx.1740.1.A1_s_atCV249280hypothetical protein-1e-19At3g46440UXS5C.G.S.X.
0.055e+030Triticum aestivumTa.8166.1.A1_atBQ161516--8e-2At1g04560AWPM-19-like membrane family proteinC.G.S.X.
0.051e+030Vitis vinifera1619690_atCB975062--9e-1At5g49800-C.G.S.X.
0.042e+030Zea maysZm.18572.1.A1_atCO518352hypothetical protein LOC100194072-2e+1At4g13195CLE44 (CLAVATA3/ESR-RELATED 44)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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