Gene omics information

Query gene ID At2g28170
Gene name ATCHX7
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3338.1At2g28170817363ATCHX7member of Putative Na+/H+ antiporter familyS.X.H.G.
0.6781.6At3g58390825008eukaryotic release factor 1 family protein / eRF1 family proteinF:translation release factor activity;P:translational termination, translation;C:nucleus;OAMFPVS.X.H.G.
0.6781.6At5g39630833959vesicle transport v-SNARE family proteinF:SNARE binding, receptor activity;P:membrane fusion, intra-Golgi vesicle-mediated transport;C:membrane;OMFPBAVS.X.H.G.
0.6378.1At1g65630842874DegP3 (DegP protease 3)Encodes a putative DegP protease.S.X.H.G.
0.5773.8At1g51900841617unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;OMBFPVAS.X.H.G.
0.5368.6At4g21240827873F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5065.3At5g37910833770seven in absentia (SINA) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination;C:nucleus;MPOFS.X.H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
343.0100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
253.5100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
221.5100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.011e-346At2g13620815847ATCHX15member of Putative Na+/H+ antiporter familyC.G.S.X.
0.061e-346At1g08140837335ATCHX6A (CATION/H+ EXCHANGER 6A)member of Putative Na+/H+ antiporter familyC.G.S.X.
0.011e-242At3g44900823624ATCHX4 (CATION/H+ EXCHANGER 4)member of Putative Na+/H+ antiporter familyC.G.S.X.
0.012e-138At1g08150837336ATCHX5member of Putative Na+/H+ antiporter familyC.G.S.X.
0.029e-136At1g08135837334CHX6B (CATION/H+ EXCHANGER 6B)F:monovalent cation:proton antiporter activity;P:cation transport;C:integral to membrane;BPFAOC.G.S.X.
0.019e-136At1g19050838487ARR7 (RESPONSE REGULATOR 7)Encodes a member of the Arabidopsis response regulator (ARR) family, most closely related to ARR15. A two-component response regulator protein containing a phosphate accepting domain in the receiver domain but lacking a DNA binding domain in the output domain. Involved in response to cytokinin and meristem stem cell maintenance. Arr7 protein is stabilized by cytokinin.C.G.S.X.
0.019e-136At1g55570842006sks12 (SKU5 Similar 12)F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOAC.G.S.X.
0.014e+034At5g60790836200ATGCN1member of GCN subfamilyC.G.S.X.
0.014e+034At5g27350832794SFP1Encodes a sugar-porter family protein that is induced during leaf senescence. The increase in its gene expression during leaf senescence is paralleled by an accumulation of monosaccharides.C.G.S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.015e+034Glycine maxGmaAffx.35364.4.S1_atAW706990--9e-13At4g16143IMPA-2 (IMPORTIN ALPHA ISOFORM 2)C.G.S.X.
0.014e-136Hordeum vulgareContig6203_atContig6203--1e-3At1g70110lectin protein kinase family proteinC.G.S.X.
0.013e-242Oryza sativaOs09g04876009637.m02770-Glycoside hydrolase, family 28 protein8e-4At3g57790glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinC.G.S.X.
0.025e+034Populus trichocarpaPtpAffx.202678.1.S1_atpmrna5339hypothetical protein-1e+0At1g68200zinc finger (CCCH-type) family proteinC.G.S.X.
0.014e+034Triticum aestivumTaAffx.25555.4.S1_atCA636241--2e+1Atmg00590-C.G.S.X.
0.013e-136Vitis vinifera1622796_atCF208469hypothetical protein LOC100247561-2e-5At5g05920DHS (DEOXYHYPUSINE SYNTHASE)C.G.S.X.
0.024e-136Zea maysZm.3382.1.A1_atAI666153hypothetical protein LOC100275576-4e+0At4g36500unknown proteinC.G.S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0006812The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage