Gene omics information

Query gene ID At2g28120
Gene name nodulin family protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2624.4At2g28120817358nodulin family proteinF:unknown;P:N-terminal protein myristoylation;C:plasma membrane;OBPFMAS.X.H.G.
0.114.1At2g25200817058unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.092.8At2g30930817644unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast, plasma membrane, membrane;BOFMPVS.X.H.G.
0.082.3At4g30270829150MERI5B (meristem-5)encodes a protein similar to endo xyloglucan transferase in sequence. It is also very similar to BRU1 in soybean, which is involved in brassinosteroid response.S.X.H.G.
0.040.9At1g70290843365ATTPS8Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
53.299.8GSM205185protoplast_KIN10_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cells
45.399.8GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
43.899.8GSM311296Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
35.399.7GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
27.699.7GSM204069protoplast_hypoxia_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.041e-242At2g39210818506nodulin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBPFMAC.G.S.X.
0.021e-242At2g34350817997nodulin-relatedF:unknown;P:unknown;C:endomembrane system;BPOFAMC.G.S.X.
0.012e-138Atcg01130--hypothetical proteinC.G.S.X.
0.022e-138At5g50260835091cysteine proteinase, putativeF:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPVBAFC.G.S.X.
0.012e-138At3g18370821366ATSYTFF:molecular_function unknown;P:biological_process unknown;C:unknown;MPOFC.G.S.X.
0.012e-138At2g16800816181high-affinity nickel-transport family proteinF:nickel ion transmembrane transporter activity, metal ion binding;P:nickel ion transport, metal ion transport;C:integral to membrane, chloroplast;OBPAC.G.S.X.
0.029e-136At4g27890828902nuclear movement family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBC.G.S.X.
0.019e-136At4g38540830011monooxygenase, putative (MO2)F:monooxygenase activity;P:metabolic process;C:unknown;BFOPAMC.G.S.X.
0.019e-136At4g14280827069bindingF:binding;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.103e-138Glycine maxGmaAffx.26311.1.S1_atBE348003--5e-2At2g28120nodulin family proteinC.G.S.X.
0.012e+034Hordeum vulgareContig17523_atContig17523--7e-2At4g08230glycine-rich proteinC.G.S.X.
0.012e+036Oryza sativaOsAffx.27204.1.S1_x_at---0C.G.S.X.
0.142e-1171Populus trichocarpaPtpAffx.219784.1.S1_atpmrna35863hypothetical protein-2e-11At2g28120nodulin family proteinC.G.S.X.
0.032e-138Triticum aestivumTa.4025.1.A1_atBJ257145--1e-1At2g28120nodulin family proteinC.G.S.X.
0.027e-238Vitis vinifera1622426_atCF205289.1--9e-5At2g39210nodulin family proteinC.G.S.X.
0.016e+032Zea maysZmAffx.226.1.A1_atAI670238--1e+1At5g49710unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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