Gene omics information

Query gene ID At2g27580
Gene name zinc finger (AN1-like) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5368.6At2g27580817304zinc finger (AN1-like) family proteinF:DNA binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVFS.X.H.G.
0.071.9At4g21980828287APG8A (AUTOPHAGY 8A)Encodes APG8, a component of autophagy conjugation pathway. Delivered to the lumens of vacuole under nitrogen-starvation condition. Highest expression in flowers. mRNA abundance increased during dark-induced carbon starvation. Predominantly cytoplasmic with or without N starvation. Upon concanamycin A the protein accumulates in the central vacuole as punctuate structures that resemble autophagic bodies. This localization is more abundant upon N starvation.S.X.H.G.
0.051.1At4g30390829162unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.040.9At5g11680831040unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cytosol, plasma membrane;MOFPS.X.H.G.
0.020.4At4g12040826812zinc finger (AN1-like) family proteinF:DNA binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVAFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
70.599.9GSM184906Arabidopsis, root cells, protophloem, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
37.499.7GSM184904Arabidopsis, root cells, protophloem, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
33.799.7GSM204069protoplast_hypoxia_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
30.599.7E-MEXP-1443-raw-cel-1581869803
24.199.6GSM173443wild-type Arabidopsis, biological rep2GSE7211A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
23.999.6E-MEXP-449-raw-cel-676423362
23.499.6GSM184905Arabidopsis, root cells, protophloem, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
22.099.6E-MEXP-1443-raw-cel-1581869921
21.499.6GSM131448AtGen_6-9212_Heatstress-Shoots-1.0h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)
20.399.6E-MEXP-1443-raw-cel-1581869745
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.084e-342At3g52800824446zinc finger (AN1-like) family proteinF:DNA binding, zinc ion binding;P:response to chitin;C:cellular_component unknown;MPOVFC.G.S.X.
0.024e-342At1g53200841754unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBC.G.S.X.
0.046e-238At3g06890819874unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.022e-136At5g01170831732glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFVBC.G.S.X.
0.032e-136At3g22040821764receptor-like protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.029e-134At5g32613833244zinc knuckle (CCHC-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:chloroplast;PFVC.G.S.X.
0.029e-134At5g38720833863unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVAC.G.S.X.
0.019e-134At4g32920829429glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:vacuole;BOMPFVAC.G.S.X.
0.019e-134At3g22270821797unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-136Glycine maxPsAffx.psZS007xH08f_s_atPsAffx.psZS007xH08f--2e-1At2g27580zinc finger (AN1-like) family proteinC.G.S.X.
0.041e-136Hordeum vulgareContig3859_s_atContig3859--3e-1At4g10970unknown proteinC.G.S.X.
0.051e-138Oryza sativaOsAffx.20211.1.S1_at---0C.G.S.X.
0.051e+034Populus trichocarpaPtpAffx.8179.1.S1_atCV255984hypothetical protein-2e+0At2g27580zinc finger (AN1-like) family proteinC.G.S.X.
0.046e-238Triticum aestivumTaAffx.92093.1.S1_atBJ280985--4e+0At5g15265unknown proteinC.G.S.X.
0.043e-134Vitis vinifera1616806_atCF605749hypothetical protein LOC100259004-6e-2At2g01340unknown proteinC.G.S.X.
0.034e-134Zea maysZm.10467.1.S1_atCA826991hypothetical protein LOC100274742-1e+0At2g27580zinc finger (AN1-like) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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