Gene omics information

Query gene ID At2g27320
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5773.8At2g27320817275unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PFBS.X.H.G.
1.00100.0At4g38530830010ATPLC1 (ARABIDOPSIS THALIANA PHOSPHOLIPASE C 1)Encodes a putative phosphoinositide-specific phospholipase C. There are two genes called ATPLC1, one corresponding to AT4g38530 (this one) and one corresponding to AT5g58670.S.X.H.G.
0.8089.8At5g38310833813unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MPS.X.H.G.
0.7586.9At2g21910816727CYP96A5member of CYP96AS.X.H.G.
0.2930.3At1g72950843626disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
585.3100.0E-MEXP-807-raw-cel-1173273116
493.6100.0E-MEXP-807-raw-cel-1173273088
411.2100.0E-MEXP-807-raw-cel-1173273252
280.7100.0E-MEXP-807-raw-cel-1173273144
264.8100.0GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
195.3100.0E-MEXP-807-raw-cel-1173273223
174.5100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
170.7100.0E-MEXP-807-raw-cel-1173273196
152.499.9E-MEXP-807-raw-cel-1173273060
142.299.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.594e-57222At2g38255818405unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFBC.G.S.X.
0.412e-34147At2g35250818092unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFBC.G.S.X.
0.015e-136At4g23370828436unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFBC.G.S.X.
0.022e+034At5g40250834023zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVC.G.S.X.
0.022e+034At4g38230829980CPK26member of Calcium Dependent Protein KinaseC.G.S.X.
0.012e+034At4g38890830044dihydrouridine synthase family proteinF:tRNA dihydrouridine synthase activity, FAD binding, catalytic activity;P:oxidation reduction, tRNA processing, metabolic process;C:vacuole;BOMFPAC.G.S.X.
0.012e+034At4g13920827026AtRLP50 (Receptor Like Protein 50)F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAVC.G.S.X.
0.012e+034At4g13810827015AtRLP47 (Receptor Like Protein 47)F:protein binding;P:signal transduction, defense response;C:unknown;PMOBFAVC.G.S.X.
0.022e+034At4g15053827167unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PFBOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e+034Glycine maxGmaAffx.43119.1.A1_atCD392171--1e+1At5g28642unknown proteinC.G.S.X.
0.034e+032Hordeum vulgareContig25509_atContig25509--7e-2At5g25240-C.G.S.X.
0.056e-550Oryza sativaOsAffx.24880.1.S1_at---0C.G.S.X.
0.034e-240Populus trichocarpaPtpAffx.201375.1.S1_s_atpmrna2713hypothetical protein-6e-1At5g52150zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.038e-342Triticum aestivumTaAffx.58096.1.S1_atCA622454--4e-3At2g27320unknown proteinC.G.S.X.
0.036e-134Vitis vinifera1608168_atCB345156--1e+1At2g18300basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.028e-134Zea maysZm.11120.1.A1_atBM337897hypothetical protein LOC100273183-2e-2At3g13850LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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