Gene omics information

Query gene ID At2g27120
Gene name TIL2 (TILTED 2)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g27120817254TIL2 (TILTED 2)Encodes a protein with similarity to DNA polymerase epsilon catalytic subunit. Based on yeast two hybrid analysis, not predicted to be a subunit of the DNA polymerase epsilon complex. No phenotype observed in homozygous mutant embryos or plants but in combination with TIL1-1/til1-1 heterozygotes arrest earlier than til1 homozygotes suggesting TIL2 functions redundantly with TIL1.S.X.H.G.
0.9797.6At5g60250836147zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding, nucleic acid binding;P:unknown;C:unknown;MFPOBS.X.H.G.
0.9597.0At2g44190819026EDE1 (ENDOSPERM DEFECTIVE 1)Encodes a novel microtubule binding protein that preferentially associates with nuclear microtubules during mitosis and is essential during the mitotic and cytokinetic stages that generate the endosperm and embryo.S.X.H.G.
0.9597.0At4g35560829708-F:molecular_function unknown;P:unknown;C:CUL4 RING ubiquitin ligase complex;MOFPBS.X.H.G.
0.9597.0At2g22600816791KH domain-containing proteinF:RNA binding, nucleic acid binding;P:biological_process unknown;C:unknown;MPFOS.X.H.G.
0.9597.0At1g08600837382ATRXF:helicase activity, DNA binding, nucleic acid binding, ATP binding;P:unknown;C:unknown;MOBFPVAS.X.H.G.
0.9597.0At1g23210838930AtGH9B6 (Arabidopsis thaliana glycosyl hydrolase 9B6)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOFS.X.H.G.
0.9597.0At5g49150834974GEX2 (GAMETE EXPRESSED 2)Encodes a transmembrane domain containing protein expressed in sperm cells.S.X.H.G.
0.9496.7At4g00240826673PLDBETA2member of C2-PLD subfamilyS.X.H.G.
0.9496.7At4g08590826420ORTHL (ORTHRUS-LIKE)F:ubiquitin-protein ligase activity, zinc ion binding;P:protein ubiquitination;C:cytoplasm;MPOFBVS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8301731At1g08260837346TIL1 (TILTED 1)Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.C.G.S.X.
0.015e-242At4g37780829934MYB87 (MYB DOMAIN PROTEIN 87)"encoded by the Myb-like transcription factor MYB87, regulates axillary meristem formation, expressed throughout the plant. Member of the R2R3 factor gene family."C.G.S.X.
0.012e-140At2g21790816715RNR1 (RIBONUCLEOTIDE REDUCTASE 1)encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repairC.G.S.X.
0.018e-138At4g35770829730SEN1 (SENESCENCE 1)Senescence-associated gene that is strongly induced by phosphate starvation. Transcripts are differentially regulated at the level of mRNA stability at different times of day. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.C.G.S.X.
0.018e-138At3g26210822222CYP71B23putative cytochrome P450C.G.S.X.
0.003e+036At5g64300836551ATGCHencodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. It also has 3,4-dihydroxy-2-butanone-4-phosphate synthase activity which makes it a bifunctional enzyme involved in the formation of the pyrimidine and of the carbohydrate from GTP and ribulose-5-phosphate, respectivelyC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-759Glycine maxPsAffx.C96000029_atPsAffx.C96000029--2e-7At2g27120TIL2 (TILTED 2)C.G.S.X.
0.012e+036Hordeum vulgareHVSMEl0002F13r2_x_atHVSMEl0002F13r2--3e-1At3g12480NF-YC11 (NUCLEAR FACTOR Y, SUBUNIT C11)C.G.S.X.
0.222e-73280Oryza sativaOs02g05119009630.m02953-DNA-directed DNA polymerase B family protein6e-88At1g08260TIL1 (TILTED 1)C.G.S.X.
0.011e+038Populus trichocarpaPtpAffx.31292.1.S1_a_atDN486791hypothetical protein-6e-4At1g08260TIL1 (TILTED 1)C.G.S.X.
0.013e+036Triticum aestivumTa.8966.1.S1_atBQ162701--5e+0At4g21610LOL2 (LSD ONE LIKE 2)C.G.S.X.
0.012e-138Vitis vinifera1619318_atBQ793250hypothetical protein LOC100248394-5e+0At5g65840-C.G.S.X.
0.014e-138Zea maysZmAffx.476.1.A1_atAI677574hypothetical protein LOC100272823-1e+1Atcg00800-C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006139The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
LGO:0006260The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

00230Link to KEGG PATHWAYPurine metabolism
00240Link to KEGG PATHWAYPyrimidine metabolism
01100Link to KEGG PATHWAYMetabolic pathways
03030Link to KEGG PATHWAYDNA replication
03410Link to KEGG PATHWAYBase excision repair
03420Link to KEGG PATHWAYNucleotide excision repair
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