CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g27010

Gene name CYP705A9

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.58 73.8 At2g27010 817243 CYP705A9 member of CYP705A S.X. H.G.
0.78 88.6 At3g45530 823694 DC1 domain-containing protein F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMO S.X. H.G.
0.74 86.1 At1g66450 842963 DC1 domain-containing protein F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;PO S.X. H.G.
0.64 78.9 At4g11550 826759 DC1 domain-containing protein F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMO S.X. H.G.
0.64 78.9 At4g13130 826927 DC1 domain-containing protein F:protein binding, zinc ion binding;P:biological_process unknown;C:chloroplast envelope;PMO S.X. H.G.
0.63 78.1 At3g07000 819885 DC1 domain-containing protein F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMO S.X. H.G.
0.62 77.3 At5g59930 836115 DC1 domain-containing protein / UV-B light-insensitive protein, putative F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;POMF S.X. H.G.
0.55 70.6 At3g46720 823825 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF S.X. H.G.
0.53 68.6 At1g55700 842019 DC1 domain-containing protein F:protein binding, zinc ion binding;P:biological_process unknown;C:intracellular;PMO S.X. H.G.
0.50 65.3 At1g33610 840255 protein binding F:protein binding;P:signal transduction;C:endomembrane system;PMOBFAV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
298.2 100.0 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
231.4 100.0 GSM184480 Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
203.6 100.0 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
202.8 100.0 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
200.4 100.0 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
198.7 100.0 GSM184477 Lateral Root Cap root cells 2hr KCl control treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
167.2 100.0 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
135.5 99.9 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
122.0 99.9 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
120.0 99.9 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.84 0 926 At2g27000 817242 CYP705A8 member of CYP705A C.G. S.X.
0.54 1e-88 327 At4g15350 827201 CYP705A2 member of CYP705A C.G. S.X.
0.50 1e-70 268 At5g47990 834850 CYP705A5 encodes a member of the CYP705A family of cytochrome P450 enzymes. It appears to catalyze the addition of a double bond to thalian-diol at carbon 15. Reduced levels of THAD expression lead to a build up of thalian-diol in root extracts. thad1-1 mutants also have longer roots than wild type seedlings. C.G. S.X.
0.52 4e-55 216 At3g20950 821645 CYP705A32 member of CYP705A C.G. S.X.
0.45 1e-51 204 At3g20120 821555 CYP705A21 member of CYP705A C.G. S.X.
0.57 3e-49 196 At3g20940 821644 CYP705A30 a member of A-type cytochrome P450 C.G. S.X.
0.40 2e-44 180 At3g20110 821554 CYP705A20 member of CYP705A C.G. S.X.
0.45 5e-39 163 At2g14100 815896 CYP705A13 a member of the cytochrome P450 family C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+0 36 Glycine max HgAffx.11572.1.S1_at CB934878 - - 1e+0 At3g21270 ADOF2 C.G. S.X.
0.02 4e-1 36 Hordeum vulgare Contig11220_s_at Contig11220 - - 4e+0 At4g10160 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 4e-1 38 Oryza sativa Os02g0570700 AK070167.1 - Cytochrome P450 family protein 6e-5 At3g32047 electron carrier/ heme binding / iron ion binding / monooxygenase C.G. S.X.
0.02 2e-2 42 Populus trichocarpa PtpAffx.216781.1.S1_at pmrna31778 hypothetical protein - 2e-7 At2g42250 CYP712A1 C.G. S.X.
0.02 2e-1 38 Triticum aestivum TaAffx.50125.2.S1_at CA745672 - - 7e-2 At2g27010 CYP705A9 C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1616862_at CB343429 hypothetical protein LOC100250930 - 1e+0 At2g19385 zinc ion binding C.G. S.X.
0.01 1e+0 34 Zea mays Zm.5942.1.A1_at AY103692.1 - - 3e-56 At5g18620 CHR17 (CHROMATIN REMODELING FACTOR17) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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