Gene omics information

Query gene ID At2g26790
Gene name pentatricopeptide (PPR) repeat-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g26790817220pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:mitochondrion;POMFBAVS.X.H.G.
0.7284.8At2g06140815170transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.7184.2At2g44880819097pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:endomembrane system;POFMS.X.H.G.
0.6882.2At5g26350832704transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.6075.7At1g349043766926transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5974.7At2g077373768151transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5873.8At1g18310838411glycosyl hydrolase family 81 proteinF:hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity;P:cell wall macromolecule catabolic process;C:unknown;FOBPMS.X.H.G.
0.5873.8At2g043103768003transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5673.0At1g09410837463pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POMFBS.X.H.G.
0.5368.6At3g19070821441cell wall protein-relatedF:transcription factor activity;P:regulation of transcription;C:unknown;OMFPBVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
485.3100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
363.5100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
349.2100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
326.8100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
292.0100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
274.2100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
264.7100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
248.1100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
230.0100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
223.1100.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.151e-1999At1g13800837941pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;POMFBAC.G.S.X.
0.013e-138At3g23750821957leucine-rich repeat family protein / protein kinase family proteinF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.013e-138At3g24310822019MYB305 (myb domain protein 305)snapdragon myb protein 305 homolog (myb)C.G.S.X.
0.013e-138At2g26390817179serpin, putative / serine protease inhibitor, putativeF:serine-type endopeptidase inhibitor activity;P:biological_process unknown;C:cellular_component unknown;MVPBOAFC.G.S.X.
0.011e+036At5g63200836441tetratricopeptide repeat (TPR)-containing proteinF:binding;P:biological_process unknown;C:cellular_component unknown;OBMAFPC.G.S.X.
0.011e+036At3g28780822510unknown proteinF:molecular_function unknown;P:pollen exine formation;C:endomembrane system;BOMPFVAC.G.S.X.
0.015e+034At5g05240830406-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e+036Glycine maxGma.5730.1.S1_atBM523055--2e-1At5g24400emb2024 (embryo defective 2024)C.G.S.X.
0.022e+034Hordeum vulgareContig14030_atContig14030--8e-13At1g76880trihelix DNA-binding protein, putativeC.G.S.X.
0.012e+036Oryza sativaOsAffx.4311.1.S1_at---0C.G.S.X.
0.017e-344Populus trichocarpaPtpAffx.201175.1.S1_atpmrna2327hypothetical protein-8e-57At5g02860pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.015e+034Triticum aestivumTaAffx.107556.1.S1_atCA698050--4e+0At5g54760eukaryotic translation initiation factor SUI1, putativeC.G.S.X.
0.014e-136Vitis vinifera1615854_atCF512129hypothetical protein LOC100266517-3e-1At5g23950C2 domain-containing proteinC.G.S.X.
0.012e+034Zea maysZm.10123.1.S1_atBM380717heat- and acid-stable phosphoprotein-3e-14At5g46020unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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