Gene omics information

Query gene ID At2g26450
Gene name pectinesterase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g26450817185pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMOS.X.H.G.
0.9697.3At1g68110843139epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedF:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:clathrin coat assembly;C:clathrin coat;PMFOS.X.H.G.
0.9697.3At3g20580821605COBL10 (COBRA-LIKE PROTEIN 10 PRECURSOR)F:unknown;P:biological_process unknown;C:anchored to membrane;PS.X.H.G.
0.9697.3At1g04540839498C2 domain-containing proteinF:unknown;P:biological_process unknown;C:membrane;PMOFBS.X.H.G.
0.9296.0At2g31500817708CPK24member of Calcium Dependent Protein KinaseS.X.H.G.
0.9296.0At3g17980821323C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOS.X.H.G.
0.9195.6At3g05610819727pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;OBPFMVAS.X.H.G.
0.9195.6At3g09530820110ATEXO70H3 (exocyst subunit EXO70 family protein H3)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.S.X.H.G.
0.9095.1At2g18470816362protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MOPBFVAS.X.H.G.
0.8994.6At3g06260819800GATL4 (Galacturonosyltransferase-like 4)Encodes a protein with putative galacturonosyltransferase activity.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
160.399.9GSM154508Arabidopsis growing pollen tubes rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
156.899.9E-MEXP-1138-raw-cel-1432772522
136.199.9E-ATMX-35-raw-cel-1574334864
134.099.9E-MEXP-1138-raw-cel-1432772586
132.299.9GSM154506Arabidopsis hydrated pollen grains rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
131.599.9E-MEXP-1138-raw-cel-1432772970
128.999.9E-MEXP-1138-raw-cel-1432772554
128.199.9E-MEXP-1138-raw-cel-1432772778
127.299.9E-MEXP-1138-raw-cel-1432772650
126.399.9E-MEXP-1138-raw-cel-1432773034
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.567e-125448At4g33230829459pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMOC.G.S.X.
0.034e-654At1g23200838928pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFAOMC.G.S.X.
0.021e-242At2g47030819317VGDH1F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMOC.G.S.X.
0.026e-240At4g02300827708pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMC.G.S.X.
0.026e-240At3g47400823894pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBOFVMAC.G.S.X.
0.016e-240At2g14910815980unknown proteinF:unknown;P:unknown;C:chloroplast;BOPMC.G.S.X.
0.012e-138At2g36700818242pectinesterase family proteinF:pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-448Glycine maxGmaAffx.92477.1.S1_atCF808202--4e-7At2g47550pectinesterase family proteinC.G.S.X.
0.024e-136Hordeum vulgareContig5814_atContig5814--2e-2At4g30330small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putativeC.G.S.X.
0.022e+036Oryza sativaOs05g0361500AK100947.1-Pectinesterase family protein2e-5At1g02810pectinesterase family proteinC.G.S.X.
0.096e-654Populus trichocarpaPtpAffx.214087.1.S1_atpmrna27425hypothetical protein-3e-10At4g33230pectinesterase family proteinC.G.S.X.
0.021e+036Triticum aestivumTa.18244.1.A1_atCA632323--3e-1At2g26450pectinesterase family proteinC.G.S.X.
0.021e+034Vitis vinifera1617668_atCF514659hypothetical protein LOC100243346-5e-4At4g11080high mobility group (HMG1/2) family proteinC.G.S.X.
0.021e-138Zea maysZm.8326.1.A1_atBM073693--1e+0At5g07100WRKY26C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0042545The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00400Link to KaPPA-View 4Homogalacturonan degradation
00422Link to KaPPA-View 4Carbohydrate esterases
00442Link to KaPPA-View 4Rhamnogalacturonan II degradation



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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