Gene omics information

Query gene ID At2g26440
Gene name pectinesterase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4963.5At2g26440817184pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMS.X.H.G.
0.7486.1At2g14560815943LURP1 (LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA)Encodes LURP1, a member of the LURP cluster (late upregulated in response to Hyaloperonospora parasitica) which exhibits a pronounced upregulation after recognition of the pathogenic oomycte H. parasitica. LURP1 is required for full basal defense to H. parasitica and resistance to this pathogen mediated by the R-proteins RPP4 and RPP5.S.X.H.G.
0.7184.2At2g40750818670WRKY54member of WRKY Transcription Factor; Group IIIS.X.H.G.
0.6982.9At5g24210832488lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;POS.X.H.G.
0.6378.1At1g21250838721WAK1 (CELL WALL-ASSOCIATED KINASE)cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component.S.X.H.G.
0.5469.5At3g04210819576disease resistance protein (TIR-NBS class), putativeF:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, endomembrane system;PBMOS.X.H.G.
0.5469.5At3g56400824807WRKY70member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1.S.X.H.G.
0.5469.5At5g60900836211RLK1 (RECEPTOR-LIKE PROTEIN KINASE 1)Encodes a receptor-like protein kinase.S.X.H.G.
0.5166.3At5g10760830943aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:apoplast;PMFOS.X.H.G.
0.4862.5At2g37710818348RLK (receptor lectin kinase)Induced in response to Salicylic acid.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
27.599.7GSM134367St.Clair_1-28_339_Cvi-1_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1
27.499.7GSM134386St.Clair_1-47_334_Est_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5754Expression Level Polymorphism Project (ELP) - Est
25.999.7GSM269818C2 leaf-well watered-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
24.699.6GSM134359St.Clair_1-20_361_Cvi-1_0.02%-silwet_Rep2_ATH1GSE5753Expression Level Polymorphism Project (ELP) - Cvi-1
24.299.6GSM134387St.Clair_1-48_397_Est_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5754Expression Level Polymorphism Project (ELP) - Est
21.799.6GSM134441St.Clair_1-66_380_Kin-0_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5757Expression Level Polymorphism Project (ELP) - Kin-0
20.999.6GSM134405St.Clair_1-102_350_Tsu-1_0.30mM-SA-in-0.02%-silwet_Rep3_ATH1GSE5755Expression Level Polymorphism Project (ELP) - Tsu-1
19.599.6GSM244455Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
18.499.5E-MEXP-546-raw-cel-863289586
18.299.5GSM134385St.Clair_1-46_293_Est_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5754Expression Level Polymorphism Project (ELP) - Est
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.051e-552At3g49220824083pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMC.G.S.X.
0.049e-446At3g10720820241pectinesterase, putativeF:pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMC.G.S.X.
0.021e-242At5g04960830378pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMOC.G.S.X.
0.041e-242At4g33220829458enzyme inhibitor/ pectinesteraseF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMC.G.S.X.
0.031e-242At3g43270823402pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:plant-type cell wall;PBFMC.G.S.X.
0.025e-240At2g47550819368pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMOC.G.S.X.
0.042e-138At5g20860832209pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMC.G.S.X.
0.012e-138At5g04970830379pectinesterase, putativeF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall;MOPBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-346Glycine maxGma.5447.2.S1_atBI969814--3e-33At4g33220enzyme inhibitor/ pectinesteraseC.G.S.X.
0.022e+034Hordeum vulgareContig17328_atContig17328--3e-2At4g38020tRNA/rRNA methyltransferase (SpoU) family proteinC.G.S.X.
0.012e+036Oryza sativaOs02g0685900C22384-Calcium dependent protein kinase1e-16At4g38230CPK26C.G.S.X.
0.155e-963Populus trichocarpaPtpAffx.219727.1.S1_atpmrna35741hypothetical protein-4e-9At2g26440pectinesterase family proteinC.G.S.X.
0.023e+034Triticum aestivumTaAffx.29282.1.S1_atCA646379--7e-1At1g76510ARID/BRIGHT DNA-binding domain-containing proteinC.G.S.X.
0.063e-756Vitis vinifera1615574_atCB977067hypothetical protein LOC100245304-7e-9At2g45220pectinesterase family proteinC.G.S.X.
0.021e+034Zea maysZmAffx.866.1.A1_atAI770731--2e-1At5g55850NOIC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0042545The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00400Link to KaPPA-View 4Homogalacturonan degradation
00422Link to KaPPA-View 4Carbohydrate esterases
00442Link to KaPPA-View 4Rhamnogalacturonan II degradation



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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