Gene omics information

Query gene ID At2g26190
Gene name calmodulin-binding family protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6277.3At2g26190817159calmodulin-binding family proteinF:calmodulin binding;P:N-terminal protein myristoylation;C:unknown;PFOBS.X.H.G.
0.7385.5At5g47910834842RBOHD (RESPIRATORY BURST OXIDASE HOMOLOGUE D)NADPH/respiratory burst oxidase protein D (RbohD).Interacts with AtrbohF gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.S.X.H.G.
0.7083.5At1g11050837646protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.6982.9At3g16720820924ATL2RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations.S.X.H.G.
0.6075.7At1g07135837224glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;BMPOFVAS.X.H.G.
0.5974.7At3g59080825077aspartyl protease family proteinF:DNA binding, aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PMFOS.X.H.G.
0.5570.6At3g46600823813scarecrow transcription factor family proteinF:transcription factor activity;P:response to chitin, regulation of transcription;C:cellular_component unknown;PBMS.X.H.G.
0.5368.6At1g70740843411protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.5267.4At1g28380839735NSL1 (necrotic spotted lesions 1)This gene is predicted to encode a protein involved in negatively regulating salicylic acid-related defense responses and cell death programs. nsl1 mutants develop necrotic lesions spontaneously and show other features of a defense response, such as higher levels of SA and disease resistance-related transcripts, in the absence of a biotic stimulus. The NSL1 protein is predicted to have a MACPF domain, found in proteins that form a transmembrane pore in mammalian immune responses. NSL1 transcript levels do not appear to change in response to biotic stresses, but are elevated by cycloheximide in seedlings, and by sodium chloride in roots.S.X.H.G.
0.5065.3At1g19770838565ATPUP14Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
38.999.8GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
38.499.8GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
36.799.7GSM39205Col_Chitin3GSE2169rre1 and rre2 mutants
35.699.7GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutants
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.571e-113410At4g33050829442EDA39 (embryo sac development arrest 39)F:calmodulin binding;P:polar nucleus fusion, response to chitin;C:cellular_component unknown;PFOC.G.S.X.
0.106e-1169At3g13600820562calmodulin-binding family proteinF:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;MOFPBVAC.G.S.X.
0.072e-1067At3g58480825017calmodulin-binding family proteinF:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PFOMBC.G.S.X.
0.119e-756At5g57010835803calmodulin-binding family proteinF:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PFBOC.G.S.X.
0.041e-242At3g52870824453calmodulin-binding family proteinF:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PFBOC.G.S.X.
0.012e-138At3g20260821570structural constituent of ribosomeF:structural constituent of ribosome;P:translation;C:ribosome, intracellular;MOPFVBC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.171e-1275Glycine maxGma.13076.1.S1_atBQ473576--9e-13At2g26190calmodulin-binding family proteinC.G.S.X.
0.054e-136Hordeum vulgareContig18490_atContig18490--7e-5At3g52870calmodulin-binding family proteinC.G.S.X.
0.083e-552Oryza sativaOs05g0197300AK106389.1-IQ calmodulin-binding region domain containingprotein2e-5At2g26190calmodulin-binding family proteinC.G.S.X.
0.174e-25117Populus trichocarpaPtpAffx.206380.1.S1_atpmrna12672hypothetical protein-2e-13At5g57010calmodulin-binding family proteinC.G.S.X.
0.056e-550Triticum aestivumTa.13245.1.S1_x_atBQ170197--1e-2At3g52870calmodulin-binding family proteinC.G.S.X.
0.148e-23107Vitis vinifera1620562_atCB343617hypothetical protein LOC100250890-3e-20At4g33050EDA39 (embryo sac development arrest 39)C.G.S.X.
0.025e+032Zea maysZm.3519.1.A1_atAW053043--2e-1At2g20613unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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