Gene omics information

Query gene ID At2g25890
Gene name glycine-rich protein / oleosin
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g25890817130glycine-rich protein / oleosinF:molecular_function unknown;P:lipid storage;C:monolayer-surrounded lipid storage body, integral to membrane, membrane;PBS.X.H.G.
0.8693.1At2g38905818475hydrophobic protein, putative / low temperature and salt responsive protein, putativeF:unknown;P:hyperosmotic salinity response, response to cold;C:endomembrane system, integral to membrane;BFPMOS.X.H.G.
0.6781.6At2g21490816688LEA (DEHYDRIN LEA)F:molecular_function unknown;P:response to water, response to stress;C:cellular_component unknown;PMFOBVS.X.H.G.
0.6781.6At4g16160827308mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinHomologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family. Two OEP16 genes are closely related to each other and are conserved in all land plants, OEP16-2, also named OEP16-S, and OEP16-1 (renamed OEP16-L) are result of the gene duplication event that occurred prior to divergence of bryophytes and seed plants. Predominantly expressed in seed and is not inducible by cold treatment. atOEP16-S gained an additional exon. The promoter region of atOEP16-S (but not atOEP16-L) contains multiple G-box ABA-responsive elements. The atOEP16-S promoter conferred developmentally regulated seed- and pollen-specific GUS expression in tobacco.S.X.H.G.
0.4050.8At1g54870841926binding / catalytic/ oxidoreductaseF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:chloroplast;BOMFPAVS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
253.0100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
226.0100.0GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
221.4100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
216.3100.0GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
190.8100.0GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
184.8100.0GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
177.1100.0GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
175.5100.0GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
171.6100.0GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.044e-652At5g49700835033DNA-binding protein-relatedF:unknown;P:biological_process unknown;C:unknown;PMBFC.G.S.X.
0.032e-446At1g75230843860HhH-GPD base excision DNA repair family proteinF:catalytic activity;P:DNA repair, base-excision repair;C:nucleus;OBFPAMC.G.S.X.
0.049e-444At4g12050826813DNA-binding protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVC.G.S.X.
0.044e-342At2g36080818181DNA-binding protein, putativeEncodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity.C.G.S.X.
0.024e-342At2g01690814698bindingF:binding;P:biological_process unknown;C:plasma membrane;OMFPBVC.G.S.X.
0.051e-240At5g09750830835HEC3 (HECATE 3)F:transcription factor activity, DNA binding;P:transmitting tissue development, carpel formation, regulation of transcription;C:nucleus;POFC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.055e-342Glycine maxGmaAffx.56281.1.S1_atBU761780--3e+0At5g05590PAI2 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 2)C.G.S.X.
0.054e-134Hordeum vulgareContig5597_s_atContig5597--4e+0At5g54095unknown proteinC.G.S.X.
0.071e-138Oryza sativaOs09g04960009637.m02815--2e-1At3g06000leucine-rich repeat family proteinC.G.S.X.
0.058e-238Populus trichocarpaPtpAffx.153622.1.A1_s_atCV249906hypothetical protein-1e+0At5g59990-C.G.S.X.
0.061e-240Triticum aestivumTaAffx.104796.1.S1_x_atCA744716--3e+0At3g07590small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeC.G.S.X.
0.042e-238Vitis vinifera1616177_atBQ800589similar to 3-methyladenine DNA glycosylase, putative; 31680-30045-2e+1At5g42630ATS (ABERRANT TESTA SHAPE)C.G.S.X.
0.042e+032Zea maysZm.9422.1.A1_atBM268752hypothetical protein LOC100279301-7e-2At5g07600oleosin / glycine-rich proteinC.G.S.X.
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Biological processes

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ECCGO IDProcess Name
CGO:0019915The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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