Gene omics information

Query gene ID At2g25735
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g25735817115unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.7184.2At5g27420832801zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:response to chitin, response to abscisic acid stimulus;C:endomembrane system;PMOFVS.X.H.G.
0.6781.6At1g24140839026matrixin family proteinF:metallopeptidase activity, metalloendopeptidase activity;P:proteolysis, metabolic process;C:anchored to membrane;MOPBVAFS.X.H.G.
0.6781.6At1g58420842211-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6378.1At3g01830820033calmodulin-related protein, putativeF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOBS.X.H.G.
0.5368.6At1g56060842057unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFS.X.H.G.
0.5267.4At1g35210840410unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POS.X.H.G.
0.4457.2At2g32030817763GCN5-related N-acetyltransferase (GNAT) family proteinF:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;BOFPAVMS.X.H.G.
0.3846.7At5g05300830412unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.3643.6At2g27310817274F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
138.699.9GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
112.699.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-136At4g03430827925EMB2770 (EMBRYO DEFECTIVE 2770)Encodes a nuclear protein similar to the human U5 small ribonucleoprotein-associated 102-kD protein and to the yeast pre-mRNA splicing factors Prp1p and Prp6p. STA1 expression is upregulated by cold stress, and the sta1-1 mutant is defective in the splicing of the cold-induced COR15A gene. Luciferase imaging was used to isolate a recessive mutant, sta1-1, with enhanced stability of the normally unstable luciferase transcript. This mutation also causes the stabilization of some endogenous gene transcripts and has a range of developmental and stress response phenotypes.C.G.S.X.
0.017e-134At5g12000831073kinaseF:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVAC.G.S.X.
0.017e-134At4g23300828429protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.027e-134At3g53110824477LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.C.G.S.X.
0.027e-134At2g43330818934INT1 (INOSITOL TRANSPORTER 1)Encodes a tonoplast-localized myo-inositol exporter, involved in efflux of myo-inositol from the vacuole to the cytosol. The gene is ubiquitously expressed. Reduced root growth in knock-out mutants grown on low inositol agar medium.C.G.S.X.
0.017e-134At1g71460843487pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFC.G.S.X.
0.017e-134At1g10170837555ATNFXL1 (ARABIDOPSIS THALIANA NF-X-LIKE 1)Encodes AtNFXL1, a homologue of the putative human transcription repressor NF-X1. Functions as a negative regulator of the trichothecene phytotoxin-induced defense response.C.G.S.X.
0.027e-134At1g55600842009WRKY10 (WRKY DNA-BINDING PROTEIN 10)member of WRKY Transcription Factor; Group I. It has WRKY domain at its N terminal end and zinc-finger like motif.C.G.S.X.
0.023e+032At5g24120832477SIGE (SIGMA FACTOR E)Encodes a specialized sigma factor that functions in regulation of plastid genes and is responsible for the light-dependent transcription at the psbD LRP. Activation of SIG5 is dependent upon blue light and mediated by cryptochromes.C.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-136Glycine maxGmaAffx.52912.1.A1_atAW350884--2e-1At2g25735unknown proteinC.G.S.X.
0.051e+032Hordeum vulgareContig19277_atContig19277--4e-2At2g31370bZIP transcription factor (POSF21)C.G.S.X.
Os02g02148000.041e+0Oryza sativaOs02g02160009630.m01131--2e-3At3g47110leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.051e-344Populus trichocarpaPtpAffx.210165.1.S1_atpmrna20029--1e-3At2g25735unknown proteinC.G.S.X.
0.047e-134Triticum aestivumTa.27812.1.A1_atCD863065--1e+0At2g25735unknown proteinC.G.S.X.
0.053e-340Vitis vinifera1614017_s_atCF403762hypothetical protein LOC100241560-2e-2At2g25735unknown proteinC.G.S.X.
0.055e+030Zea maysZmAffx.376.1.A1_atAI673923--8e-1At5g18710unknown proteinC.G.S.X.
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Biological processes

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ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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