Gene omics information

Query gene ID At2g25600
Gene name SPIK (Shaker Pollen Inward K+ channel)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8894.0At2g25600817099SPIK (Shaker Pollen Inward K+ channel)mutant has Impaired pollen-tube growth; member of Shaker K+ channel family, also Stelar K+ outward rectifying channel (SKOR) familyS.X.H.G.
0.8793.5At5g18910832009protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:peroxisome;MPOBFVAS.X.H.G.
0.8592.4At1g50610841483leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOFBVAS.X.H.G.
0.8491.9At1g79860844325ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth Growth.S.X.H.G.
0.8391.4At5g39400833936PTEN1F:phosphatase activity;P:N-terminal protein myristoylation, pollen development;C:cellular_component unknown;MOFPBAS.X.H.G.
0.8391.4At1g02000839289GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2)UDP-D-glucuronate 4-epimeraseS.X.H.G.
0.8391.4At3g18810821414protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;OMBPFVAS.X.H.G.
0.8290.9At2g21480816687protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.7989.1At5g05070830389zinc ion bindingF:zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MOFPS.X.H.G.
0.7989.1At3g02810821236protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOPBFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
288.1100.0GSM131636ATGE_73_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
242.2100.0GSM131638ATGE_73_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
222.5100.0GSM131637ATGE_73_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
191.4100.0E-MEXP-1138-raw-cel-1432772682
190.1100.0E-MEXP-1138-raw-cel-1432773162
185.8100.0GSM239251Columbia glabrous (C24) wild type pollenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
172.6100.0GSM154504Arabidopsis desiccated mature pollen grains rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
171.3100.0E-MEXP-1138-raw-cel-1432772650
171.2100.0E-MEXP-1138-raw-cel-1432772554
167.2100.0E-MEXP-1138-raw-cel-1432772618
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.6101160At4g32500829385AKT5member of Stelar K+ outward rectifying channel (SKOR) familyC.G.S.X.
0.142e-1275At2g26650817206AKT1 (ARABIDOPSIS K TRANSPORTER 1)Shaker-like inward rectifying potassium channel predominantly expressed in predominantly in root hairs and root endodermis.C.G.S.X.
0.011e-656At5g46240834666KAT1 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 1)Encodes a potassium channel protein (KAT1). ABA triggers KAT1 endocytosis both in epidermal cells as well as guard cells. Upon removal of ABA, KAT1 is recycled back to the plasma membrane. KAT1 is localized within 0.50.6 μm diameter microdomains at the plasma membrane surface.C.G.S.X.
0.024e-448At4g18290827555KAT2 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 2)One of the four members of the Shaker family encoding guard cell potassium inward channels. Critical to stomatal opening induced by blue light. Critical to circadian rhythm of stomatal opening. Involved in plant development in response to high light intensity. Under high light intensity, the mutant plant produced less biomass compared to the wild type.C.G.S.X.
0.011e-346At1g51350841558armadillo/beta-catenin repeat family proteinF:binding;P:biological_process unknown;C:chloroplast thylakoid lumen;MFPOC.G.S.X.
0.019e-240At5g28520832945-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.039e-240At2g22080816743unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:nucleus;MBOFPVAC.G.S.X.
0.013e-138At5g25270832599-F:molecular_function unknown;P:protein modification process;C:cellular_component unknown;OMBFVPC.G.S.X.
0.013e-138At3g56870824854unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e-138Glycine maxPsAffx.C155000013_atPsAffx.C155000013--1e-2At1g12665-C.G.S.X.
0.036e-136Hordeum vulgareY09748_atY09748potassium channel-3e-11At5g46240KAT1 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 1)C.G.S.X.
0.037e-448Oryza sativaOs01g0648000AK120308.1-Potassium channel3e-20At2g26650AKT1 (ARABIDOPSIS K TRANSPORTER 1)C.G.S.X.
0.211e-29133Populus trichocarpaPtpAffx.214184.1.S1_atpmrna27591hypothetical protein-7e-30At2g25600SPIK (Shaker Pollen Inward K+ channel)C.G.S.X.
0.034e-448Triticum aestivumTa.241.1.S1_atAF207745.1AKT1-like potassium channel-5e-10At2g26650AKT1 (ARABIDOPSIS K TRANSPORTER 1)C.G.S.X.
0.014e-136Vitis vinifera1619157_atAF359521.1inward rectifying shaker-like K+ channel-3e-66At4g18290KAT2 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 2)C.G.S.X.
0.032e-1067Zea maysZm.9559.1.S1_atAY461584.1inward rectifying shaker K+ channel-6e-21At5g46240KAT1 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009860Growth of pollen via tip extension of the intine wall.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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