Gene omics information

Query gene ID At2g25320
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5065.3At2g25320817070-F:unknown;P:unknown;C:chloroplast;MOBFPAVS.X.H.G.
0.6781.6At2g07140815283-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6781.6At3g27620822384AOX1Cencodes an isoform of alternate oxidase. expressed in all tissues examined and expression is not induced by antimycin A, an inhibitor of complex III in the mitochondrial respiratory chain.S.X.H.G.
0.6781.6At3g61340825306F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.5065.3At3g25080822099unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
186.2100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
146.499.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
144.499.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
142.799.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
139.999.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
136.799.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
135.999.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
135.099.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
134.699.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
132.799.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.500718At2g25330817071meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMOFC.G.S.X.
0.011e-244At2g20790816608protein bindingF:protein binding;P:intracellular protein transport, vesicle-mediated transport;C:clathrin adaptor complex;MOFPC.G.S.X.
0.014e-242At2g40420818635amino acid transporter family proteinEncodes a putative amino acid transporter.C.G.S.X.
0.016e-138At5g03830831702-F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MFOPC.G.S.X.
0.016e-138At5g51910835266TCP family transcription factor, putativeF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PC.G.S.X.
0.016e-138At5g07360830627amidase family proteinF:amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor;P:acrylonitrile catabolic process, aldoxime metabolic process;C:unknown;BOFMPAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.097e-20101Glycine maxGma.12069.1.S1_atBM732444--8e-21At2g25320-C.G.S.X.
0.013e-138Hordeum vulgareContig16296_atContig16296--6e+0At5g19510elongation factor 1B alpha-subunit 2 (eEF1Balpha2)C.G.S.X.
0.022e-1277Oryza sativaOs02g0613400AK108796.1-Hypothetical protein2e-13At2g25320-C.G.S.X.
0.345e-98361Populus trichocarpaPtpAffx.206803.1.S1_atpmrna13507hypothetical protein-1e-56At2g25320-C.G.S.X.
0.013e+036Triticum aestivumTaAffx.85542.1.S1_atCA621853--4e+0At4g22620auxin-responsive family proteinC.G.S.X.
0.015e-240Vitis vinifera1610071_atBQ797708hypothetical protein LOC100253046-2e-4At1g65680ATEXPB2 (ARABIDOPSIS THALIANA EXPANSIN B2)C.G.S.X.
0.031e-1895Zea maysZm.15711.1.S1_atBI993192--9e-19At2g25320-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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