Gene omics information

Query gene ID At2g25190
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g25190817057unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MPOFS.X.H.G.
0.6075.7At5g07910830685leucine-rich repeat family proteinF:protein binding;P:N-terminal protein myristoylation;C:plasma membrane;MPBOFAS.X.H.G.
0.6075.7At3g57090824876BIGYINEncodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division.S.X.H.G.
0.5773.8At3g63420825517AGG1 (Arabidopsis Ggamma-subunit 1)heterotrimeric G protein gamma-subunit (AGG1) mRNA,S.X.H.G.
0.5570.6At5g53330835414-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFS.X.H.G.
0.5368.6At5g27830832845-F:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;MOPS.X.H.G.
0.5368.6At2g40600818655appr-1-p processing enzyme family proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;BMVOAFPS.X.H.G.
0.5368.6At5g45550834591mob1/phocein family proteinF:protein binding;P:biological_process unknown;C:nucleus;MFOPS.X.H.G.
0.5267.4At1g69640843300SBH1 (SPHINGOID BASE HYDROXYLASE 1)Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.S.X.H.G.
0.4963.5At5g08335830731ATSTE14BEncodes an isoprenyl cysteine methylatransferase (ICMT) involved in the post-translational processing of proteins that have a C-terminal CaaX box. This protein appears to have higher catalytic activity and a higher transcript expression level than the other ICMT present in Arabidopsis (At5g23320). Analysis of ICMT RNAi lines suggests that this protein is involved in flower and stem development.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
56.399.8GSM284389Arabidopsis GMPE2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
44.899.8GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
33.899.7GSM244455Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1GSE9674Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
32.499.7GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
31.799.7GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
31.099.7GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
29.999.7GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
29.399.7GSM134457St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5758Expression Level Polymorphism Project (ELP) - Mt-0
29.099.7GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
27.399.7GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.281e-68260At4g31980829328unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBC.G.S.X.
0.308e-24111At1g80690844408unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFC.G.S.X.
0.344e-1995At5g25170832588unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPOFC.G.S.X.
0.096e-652At1g47740841185unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBC.G.S.X.
0.046e-342At4g17486827462unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFC.G.S.X.
0.029e-238At5g38500833838DNA bindingF:DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;OMPFBC.G.S.X.
0.019e-238At3g01610821105CDC48CAAA-type ATPase - Over 90% homologous to CDC48aC.G.S.X.
0.029e-238At3g57200824887unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PBOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.114e-1479Glycine maxGmaAffx.51578.1.S1_atCD404638--4e-14At2g25190unknown proteinC.G.S.X.
0.082e-136Hordeum vulgareContig18360_atContig18360--7e-2At5g47310unknown proteinC.G.S.X.
0.091e-1171Oryza sativaOsAffx.3183.1.S1_at---0C.G.S.X.
0.122e-344Populus trichocarpaPtpAffx.12079.1.S1_atCV256191hypothetical protein-1e-26At5g25170unknown proteinC.G.S.X.
0.054e-136Triticum aestivumTaAffx.110493.1.S1_x_atCA658450--4e-3At5g47310unknown proteinC.G.S.X.
0.074e-134Vitis vinifera1612921_atCF514773hypothetical protein LOC100242655-1e-7At4g17486unknown proteinC.G.S.X.
0.074e-548Zea maysZm.2547.1.A1_atBG840981EREBP-4 like protein-5e-11At4g17486unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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