Gene omics information

Query gene ID At2g24810
Gene name pathogenesis-related thaumatin family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8592.4At2g24810817018pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOS.X.H.G.
0.8089.8At5g53840835465F-box family protein (FBL13)F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;PS.X.H.G.
0.7586.9At1g28030839696oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:2-oxoglutarate-dependent dioxygenase activity;P:biological_process unknown;C:cellular_component unknown;POBFMS.X.H.G.
0.7486.1At1g51290841552F-box family protein (FBX10)F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;POS.X.H.G.
0.7385.5At1g64030842706serpin family protein / serine protease inhibitor family proteinF:serine-type endopeptidase inhibitor activity;P:biological_process unknown;C:cellular_component unknown;MVPBOAFS.X.H.G.
0.7385.5At1g29110839786cysteine proteinase, putativeF:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPVBAFS.X.H.G.
0.7385.5At1g65640842875DegP4 (DegP protease 4)Encodes a putative DegP protease.S.X.H.G.
0.7184.2At1g12190837772F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.7184.2At3g05310819695MIRO3Encodes a protein with similarity to MIRO GTPases.S.X.H.G.
0.7184.2At3g15490820788unknown proteinF:unknown;P:biological_process unknown;C:unknown;PFOMS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
470.1100.0GSM284394Arabidopsis GCE3GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
402.2100.0GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
390.1100.0GSM284392Arabidopsis GCE1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
276.0100.0GSM311280Laser capture microdissected (LCM) chalazal endosperm at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
200.7100.0GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
164.6100.0GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
148.299.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
129.899.9GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
127.699.9GSM284393Arabidopsis GCE2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
124.299.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.736e-61234At1g19320838514pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVC.G.S.X.
0.078e-857At1g75050843843-F:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVC.G.S.X.
0.073e-756At1g75800843913pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVAC.G.S.X.
0.045e-652At4g38660830022thaumatin, putativeF:molecular_function unknown;P:response to other organism;C:anchored to membrane;PFMBOVC.G.S.X.
0.045e-652At4g36010829757pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:anchored to membrane;PMFBOVC.G.S.X.
0.042e-550At1g75030843841ATLP-3encodes a PR5-like proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.071e-138Glycine maxGmaAffx.90538.1.A1_s_atCF806263--8e-2At2g24810pathogenesis-related thaumatin family proteinC.G.S.X.
0.042e+032Hordeum vulgareHA27E07r_atHA27E07r--4e-1At3g03660WOX11 (WUSCHEL related homeobox 11)C.G.S.X.
Os10g05249000.044e-2Oryza sativaOs04g02591009632.m01700--1e-1At4g08230glycine-rich proteinC.G.S.X.
0.044e-136Populus trichocarpaPtpAffx.215883.1.S1_atpmrna30334hypothetical protein-2e-1At1g09415NIMIN-3 (NIM1-INTERACTING 3)C.G.S.X.
0.041e+034Triticum aestivumTaAffx.4265.1.S1_atCA746765--1e+0At2g24810pathogenesis-related thaumatin family proteinC.G.S.X.
0.068e-236Vitis vinifera1616617_atAF195654.1SCUTL2-3e-5At1g75040PR5 (PATHOGENESIS-RELATED GENE 5)C.G.S.X.
0.035e-134Zea maysZm.11862.1.A1_atAW566292hypothetical protein LOC100275637-2e-1At2g40440BTB/POZ domain-containing proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0051707A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage