Gene omics information

Query gene ID At2g24400
Gene name auxin-responsive protein, putative / small auxin up RNA (SAUR_D)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At2g24400816976auxin-responsive protein, putative / small auxin up RNA (SAUR_D)F:calmodulin binding;P:response to auxin stimulus;C:cellular_component unknown;POS.X.H.G.
0.7586.9At2g41810818780-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBS.X.H.G.
0.6781.6At2g43890818993polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAS.X.H.G.
0.4457.2At2g43880818992polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAVS.X.H.G.
0.2726.2At3g14530820678geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putativeF:farnesyltranstransferase activity;P:isoprenoid biosynthetic process;C:chloroplast;OBFPMAVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
362.2100.0GSM184909Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
352.9100.0GSM184908Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
227.6100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
217.2100.0GSM184907Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
200.3100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
197.7100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
194.8100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
179.2100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
177.4100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
143.199.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.602e-51202At4g31320829259auxin-responsive protein, putative / small auxin up RNA (SAUR_C)F:calmodulin binding;P:response to auxin stimulus;C:cellular_component unknown;POC.G.S.X.
0.023e-446At2g07040815274PRK2APollen receptor kinase. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth.C.G.S.X.
0.051e-344At2g21220816659auxin-responsive protein, putativeF:calmodulin binding;P:response to auxin stimulus;C:unknown;POC.G.S.X.
0.024e-342At3g05130819675unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVC.G.S.X.
0.017e-238At2g05920815145subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:cell wall, plant-type cell wall;BPFOMAC.G.S.X.
0.047e-238At2g13570815843NF-YB7 (NUCLEAR FACTOR Y, SUBUNIT B7)F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus, intracellular;MOPFC.G.S.X.
0.013e-136At5g46920834738intron maturase, type II family proteinF:RNA binding, RNA-directed DNA polymerase activity;P:RNA-dependent DNA replication, RNA splicing;C:unknown;BOPFAMC.G.S.X.
0.033e-136At3g25760822167AOC1 (ALLENE OXIDE CYCLASE 1)encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during senescence, a process that involves jasmonic acid signalling pathway.C.G.S.X.
0.043e-136At2g21200816657auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.182e-240Glycine maxGma.8765.1.S1_atBI785026--5e-9At4g31320auxin-responsive protein, putative / small auxin up RNA (SAUR_C)C.G.S.X.
0.045e-134Hordeum vulgareContig25741_atContig25741--8e-1At2g24400auxin-responsive protein, putative / small auxin up RNA (SAUR_D)C.G.S.X.
0.042e+034Oryza sativaOsAffx.15051.1.S1_x_at---0C.G.S.X.
0.172e-859Populus trichocarpaPtpAffx.207478.1.S1_atpmrna14845SAUR family protein-8e-4At4g31320auxin-responsive protein, putative / small auxin up RNA (SAUR_C)C.G.S.X.
0.051e+034Triticum aestivumTaAffx.104796.1.S1_x_atCA744716--3e+0At3g07590small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeC.G.S.X.
0.031e+032Vitis vinifera1611443_atCA818502--9e-1At1g77885unknown proteinC.G.S.X.
0.031e-136Zea maysZm.11185.1.S1_atCF349219hypothetical protein LOC100272632-3e-14At1g27350-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0009733A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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