CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g24370

Gene name ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At2g24370 816973 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVA S.X. H.G.
0.80 89.8 At2g17890 816299 CPK16 member of Calcium Dependent Protein Kinase S.X. H.G.
0.75 86.9 At2g38500 818432 - F:molecular_function unknown;P:biological_process unknown;C:unknown;P S.X. H.G.
0.67 81.6 At1g52580 841690 ATRBL5 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 5) F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;BOMPFA S.X. H.G.
0.63 78.1 At4g10010 826592 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:cellular_component unknown;MPOFBVA S.X. H.G.
0.63 78.1 At4g04930 825832 DES-1-LIKE Encodes a sphingolipid delta4-desaturase, involved in sphingolipid biosynthesis. Specifically expressed in floral tissues. Knockout mutants were devoid of sphinga-4,8-dienine in floral tissues. S.X. H.G.
0.62 77.3 At5g14890 831341 NHL repeat-containing protein F:unknown;P:unknown;C:endomembrane system;BOMPA S.X. H.G.
0.61 76.7 At5g18910 832009 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:peroxisome;MPOBFVA S.X. H.G.
0.59 74.7 At5g12000 831073 kinase F:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVA S.X. H.G.
0.57 73.8 At2g33270 817890 ACHT3 (ATYPICAL CYS HIS RICH THIOREDOXIN 3) Encodes a member of the thioredoxin family protein. Located in the chloroplast. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
232.2 100.0 E-MEXP-285-raw-cel-440782725
221.7 100.0 E-MEXP-285-raw-cel-440782791
221.3 100.0 GSM239253 CaMV::DME pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
185.4 100.0 GSM142740 DH001_ATH1_A7-MPG1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
178.5 100.0 GSM239251 Columbia glabrous (C24) wild type pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
149.0 99.9 GSM131637 ATGE_73_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
147.4 99.9 GSM131636 ATGE_73_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
137.0 99.9 E-MEXP-1138-raw-cel-1432773034
131.0 99.9 GSM131638 ATGE_73_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
125.3 99.9 E-MEXP-1138-raw-cel-1432773322
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.63 0 803 At4g31230 829250 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVA C.G. S.X.
0.10 9e-17 89 At1g78940 844233 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVA C.G. S.X.
0.17 4e-16 87 At5g35380 833499 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVA C.G. S.X.
0.14 1e-15 85 At1g16760 838247 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVA C.G. S.X.
0.02 3e-13 77 At5g61550 836276 protein kinase family protein F:ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, protein ubiquitination;C:ubiquitin ligase complex;MPOBFVA C.G. S.X.
0.13 2e-11 71 At5g26150 832684 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA C.G. S.X.
0.14 8e-11 69 At2g07020 815272 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:unknown;MPOBFVA C.G. S.X.
0.08 5e-9 63 At3g20200 821564 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVA C.G. S.X.
0.08 2e-8 61 At5g12000 831073 kinase F:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e-1 40 Glycine max GmaAffx.74239.1.S1_at BQ740358 - - 2e-4 At4g25160 protein kinase family protein C.G. S.X.
0.01 6e-1 36 Hordeum vulgare Contig25812_at Contig25812 - - 6e-4 At1g74490 protein kinase, putative C.G. S.X.
0.03 4e-2 42 Oryza sativa Os06g0191900 9634.m00875 - Protein kinase family protein 8e-8 At4g31230 protein kinase family protein C.G. S.X.
0.30 3e-48 194 Populus trichocarpa PtpAffx.216597.1.S1_at pmrna31486 hypothetical protein - 2e-48 At2g24370 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase C.G. S.X.
0.03 3e-4 48 Triticum aestivum Ta.7718.2.S1_x_at CA593071 - - 7e-8 At1g76360 protein kinase, putative C.G. S.X.
0.05 6e-12 71 Vitis vinifera 1619378_at AY427199.1 - - 4e-7 At5g26150 protein kinase family protein C.G. S.X.
0.01 8e+0 32 Zea mays Zm.6025.1.A1_at AI665242 - - 3e+0 At4g02830 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
L GO:0006950 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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