Gene omics information

Query gene ID At2g24150
Gene name HHP3 (heptahelical protein 3)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3338.1At2g24150816949HHP3 (heptahelical protein 3)heptahelical transmembrane protein HHP3S.X.H.G.
0.3846.7At2g45970819205CYP86A8Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.S.X.H.G.
0.3541.6At5g10480830912PAS2 (PASTICCINO 2)Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids).S.X.H.G.
0.3032.1At5g19290832049esterase/lipase/thioesterase family proteinF:catalytic activity;P:unknown;C:cellular_component unknown;BPOMFVAS.X.H.G.
0.2930.3At3g55360824702CER10Enoyl-CoA reductase is involved in all very long chain fatty acids (VLCFA) elongation reactions that are required for cuticular wax, storage lipid and sphingolipid metabolism. The protein is located in the ER, but in contrast to its yeast homolog TSC13 is not particularly enriched in the nuclear envelope-vacuole junction. Mutants in this gene show abnormal organ morphology and stem glossiness. Cells in all tissues are only about 1/3 of the size of wild type cells. The morphological changes are most likely to result from the reduction in the VLCFA content of sphingolipids. Mutants also show abnormalities in the endocytic membrane organization and transport.S.X.H.G.
0.146.8At5g42100834215ATBG_PAPencodes a plasmodesmal (Pd)-associated membrane protein involved in plasmodesmal callose degradation, i.e. beta-1,3-glucanase (EC 3.2.1.39), and functions in the gating of PdS.X.H.G.
0.135.8At5g67070836842RALFL34 (ralf-like 34)Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.S.X.H.G.
0.082.3At1g13250837885GATL3 (Galacturonosyltransferase-like 3)Encodes a protein with putative galacturonosyltransferase activity.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
20.099.6GSM134517Col-0_4day_red illumination_-lincomycin_rep1GSE5759red illumination w/o lincomycin
14.699.4E-MEXP-728-raw-cel-1062074684
13.799.4GSM133307RIKEN-NAKABAYASHI3AGSE5700AtGenExpress: Effect of ABA during seed imbibition
13.599.4E-MEXP-728-raw-cel-1062074577
13.099.4GSM133306RIKEN-NAKABAYASHI2BGSE5700AtGenExpress: Effect of ABA during seed imbibition
11.999.3E-MEXP-728-raw-cel-1062074653
11.799.3GSM131666ATGE_46_CGSE5633AtGenExpress: Developmental series (shoots and stems)
11.399.3GSM133305RIKEN-NAKABAYASHI2AGSE5700AtGenExpress: Effect of ABA during seed imbibition
10.899.2E-MEXP-728-raw-cel-1062074758
10.699.2E-MEXP-728-raw-cel-1062074608
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.535e-38159At4g30850829209HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2)heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptorsC.G.S.X.
0.032e-344At5g20270832149HHP1 (HEPTAHELICAL TRANSMEMBRANE PROTEIN1)heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptorsC.G.S.X.
0.023e-240At1g28140839708unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;BPMOC.G.S.X.
0.015e-136At5g28190832895unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMBVC.G.S.X.
0.025e-136At5g62960836416unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOC.G.S.X.
0.015e-136At4g09020826481ISA3 (ISOAMYLASE 3)Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic α-amylase AMY3 is upregulated.C.G.S.X.
0.035e-136At4g19270827667unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POC.G.S.X.
0.025e-136At3g50250824187unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-242Glycine maxGmaAffx.77988.1.S1_atBE805963--7e-6At4g38320HHP5 (heptahelical protein 5)C.G.S.X.
0.044e-652Hordeum vulgareContig12269_s_atContig12269--8e-10At4g30850HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2)C.G.S.X.
0.031e-346Oryza sativaOs06g0643700BX928901-Hly-III related proteins family protein2e+0At5g20270HHP1 (HEPTAHELICAL TRANSMEMBRANE PROTEIN1)C.G.S.X.
0.115e-240Populus trichocarpaPtp.6432.1.S1_atCK103065hypothetical protein-3e-2At2g24150HHP3 (heptahelical protein 3)C.G.S.X.
0.035e-136Triticum aestivumTa.4676.2.S1_atCA732869--1e-1At4g38320HHP5 (heptahelical protein 5)C.G.S.X.
0.061e-550Vitis vinifera1612777_atBQ796950hypothetical protein LOC100262144-2e-12At4g30850HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2)C.G.S.X.
0.024e+032Zea maysZmAffx.529.1.A1_atAI711694hypothetical protein LOC100191956-3e-3At1g33250fringe-related proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
XGO:0009725A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus.
XGO:0009744A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sucrose stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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