Gene omics information

Query gene ID At2g23640
Gene name reticulon family protein (RTNLB13)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At2g23640816896reticulon family protein (RTNLB13)F:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;MPOS.X.H.G.
0.8894.0At2g19320816449unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8491.9At4g18650827599transcription factor-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMS.X.H.G.
0.8491.9At5g55750835669hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBVAS.X.H.G.
0.8491.9At5g607608361972-phosphoglycerate kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPBAFVS.X.H.G.
0.8391.4At1g75490843885DNA binding / transcription factorencodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.S.X.H.G.
0.8391.4At5g01670831701aldose reductase, putativeF:oxidoreductase activity;P:oxidation reduction;C:unknown;BMOFPAS.X.H.G.
0.8190.4At1g27990839692unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8089.8At4g10020826593AtHSD5 (hydroxysteroid dehydrogenase 5)F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAVS.X.H.G.
0.7888.6At2g33520817917-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
515.5100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
508.6100.0GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
383.1100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
305.3100.0GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
299.1100.0GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
229.4100.0GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
218.6100.0GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
212.4100.0GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
200.3100.0GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seeds
196.1100.0E-ATMX-1-raw-cel-1112746267
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.018e-238At5g02390830266unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVAC.G.S.X.
0.023e-136At3g18500821380-F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFOBC.G.S.X.
0.031e+034At5g62750836396unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVAC.G.S.X.
0.011e+034At4g17770827498ATTPS5Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.C.G.S.X.
0.011e+034At3g13870820600RHD3 (ROOT HAIR DEFECTIVE 3)required for regulated cell expansion and normal root hair development. Encodes an evolutionarily conserved protein with putative GTP-binding motifs that is implicated in the control of vesicle trafficking between the endoplasmic reticulum and the Golgi compartments.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-136Glycine maxGmaAffx.8341.1.S1_s_atBF009377--2e-1At2g23640reticulon family protein (RTNLB13)C.G.S.X.
0.026e-134Hordeum vulgareContig6000_atContig6000--6e-1At2g35585unknown proteinC.G.S.X.
0.022e+034Oryza sativaOs.51178.1.S1_at---0C.G.S.X.
0.042e+034Populus trichocarpaPtpAffx.201556.1.S1_atpmrna3058hypothetical protein-2e-3At1g42440-C.G.S.X.
0.035e+032Triticum aestivumTaAffx.37517.1.A1_atBJ275329--3e+0At2g23640reticulon family protein (RTNLB13)C.G.S.X.
0.046e+030Vitis vinifera1621755_atCF209304--4e-1At5g07225zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.022e+032Zea maysZm.17329.2.A1_atCK369732--6e+0At5g03870glutaredoxin family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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