CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At2g23620

Gene name MES1 (METHYL ESTERASE 1)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.38 46.7 At2g23620 816894 MES1 (METHYL ESTERASE 1) Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, methyl jasmonate esterase activity, and methyl IAA esterase activity in vitro. MES1 appears to be involved in MeSA hydrolysis in planta. Expression of MES1 can restore systemic acquired resistance in SAR-deficient tobacco plants. This protein does not act on MeGA4, or MEGA9 in vitro. S.X. H.G.
0.71 84.2 At3g02610 820709 acyl-[acyl-carrier-protein] desaturase/ oxidoreductase/ transition metal ion binding F:acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding;P:fatty acid metabolic process, fatty acid biosynthetic process;C:chloroplast;PBOM S.X. H.G.
0.50 65.3 At1g14960 838061 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P S.X. H.G.
0.50 65.3 At5g23840 832449 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.33 38.1 At2g28850 817434 CYP710A3 (cytochrome P450, family 710, subfamily A, polypeptide 3) member of CYP710A S.X. H.G.
0.30 32.1 At5g47980 834849 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity, acyltransferase activity;P:unknown;C:cellular_component unknown;PFB S.X. H.G.
0.29 30.3 At1g66800 842998 cinnamyl-alcohol dehydrogenase family / CAD family similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
212.8 100.0 GSM231204 chl1 at T0.5, biological rep3 GSE9148 Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
160.8 99.9 GSM231198 wild-type at T0.5, biological rep3 GSE9148 Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
124.6 99.9 GSM142750 MJ001_ATH1_A1-jones-WT1 GSE6165 The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
119.1 99.9 GSM142751 MJ001_ATH1_A2-jones-WT2 GSE6165 The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
110.9 99.9 GSM142754 MJ001_ATH1_A5-jones-WT-Rep3 GSE6165 The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
101.8 99.9 GSM134304 Penfield_1-6_endosperm-ABA_Rep3_ATH1 GSE5751 The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
78.1 99.9 GSM231201 chl1 at T0, biological rep3 GSE9148 Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
74.3 99.9 GSM231195 wild-type at T0, biological rep3 GSE9148 Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
73.0 99.9 GSM179970 Arabidopsis aux1 mutant roots, ethylene treatment, replica 2 GSE7432 Ethylene and auxin interactions in the roots of Arabidopsis seedlings
68.8 99.9 GSM179961 Arabidopsis roots, ethylene treatment, replica 2 GSE7432 Ethylene and auxin interactions in the roots of Arabidopsis seedlings
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.78 7e-123 440 At2g23600 816892 ACL (ACETONE-CYANOHYDRIN LYASE) Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, methyl jasmonate esterase activity, and methyl IAA esterase activity in vitro. MES2 appears to be involved in MeSA hydrolysis in planta. This protein does not act on MeGA4, or MEGA9 in vitro. C.G. S.X.
0.67 2e-73 276 At2g23590 816891 MES8 (METHYL ESTERASE 8) Encodes a protein shown to have carboxylesterase activity in vitro. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro. C.G. S.X.
0.43 8e-58 224 At2g23610 816893 MES3 (METHYL ESTERASE 3) Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro. C.G. S.X.
0.06 2e-6 54 At2g23550 816887 MES6 (METHYL ESTERASE 6) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco but no enzymatic activity has been identified for this protein. C.G. S.X.
0.19 4e-4 46 At4g37150 829869 MES9 (METHYL ESTERASE 9) Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, methyl jasmonate esterase activity, and methyl IAA esterase activity in vitro. MES9 appears to be involved in MeSA hydrolysis in planta. Expression of MES9 can restore systemic acquired resistance in SAR-deficient tobacco plants. This protein does not act on MeGA4, or MEGA9 in vitro. C.G. S.X.
0.07 4e-4 46 At2g23580 816890 MES4 (METHYL ESTERASE 4) Encodes a protein shown to have carboxylesterase activity and methyl salicylate esterase activity in vitro. This protein does not act on methyl IAA, methyl JA, MeGA4, or MEGA9 in vitro. C.G. S.X.
0.07 4e-4 46 At2g23560 816888 MES7 (METHYL ESTERASE 7) Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, and methyl IAA esterase activity in vitro. This protein does not act on methyl JA, MeGA4, or MEGA9 in vitro. MES7 appears to be involved in MeSA hydrolysis in planta. Expression of MES7 can restore systemic acquired resistance in SAR-deficient tobacco plants. C.G. S.X.
0.04 6e-3 42 At4g37140 829868 MEE69 (MATERNAL EFFECT EMBRYO ARREST 69) Encodes a protein with similarity to SABP2, a methyl salicylate esterase from tobacco. However, this protein is truncated and lacks two of the residues of the predicted catalytic triad, suggesting that it does not have this enzymatic activity. C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 9e-3 42 Glycine max GmaAffx.77904.1.S1_at BM086440 - - 4e-3 At2g23620 MES1 (METHYL ESTERASE 1) C.G. S.X.
0.03 2e-4 46 Hordeum vulgare Contig10373_at Contig10373 - - 1e-4 At2g23580 MES4 (METHYL ESTERASE 4) C.G. S.X.
0.04 1e-2 42 Oryza sativa Os11g0492700 9639.m02716 - Esterase/lipase/thioesterase domain containingprotein 1e-3 At4g37140 MEE69 (MATERNAL EFFECT EMBRYO ARREST 69) C.G. S.X.
0.06 4e-2 40 Populus trichocarpa Ptp.7372.1.S1_at BU862660 hypothetical protein - 9e-2 At2g23600 ACL (ACETONE-CYANOHYDRIN LYASE) C.G. S.X.
0.04 1e-1 38 Triticum aestivum TaAffx.5312.1.S1_x_at CA715271 - - 1e-2 At2g23580 MES4 (METHYL ESTERASE 4) C.G. S.X.
0.03 3e-2 38 Vitis vinifera 1617704_at CB914633 hypothetical protein LOC100268006 - 1e-7 At2g23610 MES3 (METHYL ESTERASE 3) C.G. S.X.
0.03 3e+0 32 Zea mays Zm.8742.1.A1_at BM075443 - - 5e+0 At4g38495 - C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009627 The salicylic acid mediated response to a pathogen which confers broad spectrum resistance.
X GO:0009696 The chemical reactions and pathways involving of salicylic acid (2-hydroxybenzoic acid), a derivative of benzoic acid.
S GO:0009817 A response of an organism to a fungus that prevents the occurrence or spread of disease.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage