Gene omics information

Query gene ID At2g23170
Gene name GH3.3
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8089.8At2g23170816849GH3.3encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro.S.X.H.G.
0.7586.9At1g59500842240GH3.4encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro.S.X.H.G.
0.5065.3At2g14960815985GH3.1encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin.S.X.H.G.
0.4659.8At3g58190824988LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29)This gene contains two auxin-responsive element (AuxRE).S.X.H.G.
0.2522.6At1g15580838128IAA5 (INDOLE-3-ACETIC ACID INDUCIBLE 5)auxin induced proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
139.899.9E-MEXP-715-raw-cel-1121836221
126.899.9E-MEXP-715-raw-cel-1121836361
121.999.9E-MEXP-715-raw-cel-1121836087
113.999.9E-MEXP-715-raw-cel-1121836113
110.899.9GSM75510Col-0 6h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
107.899.9GSM75509Col-0 2h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
107.499.9GSM75514Col-0 6h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
105.199.9E-MEXP-715-raw-cel-1121836005
101.499.9E-MEXP-715-raw-cel-1121836247
100.799.9GSM75520slr-1 2h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.691e-126454At4g37390829893BRU6Encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. May function as a negative component in auxin signaling by regulating auxin activity.C.G.S.X.
0.707e-54212At1g59500842240GH3.4encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro.C.G.S.X.
0.325e-36153At2g14960815985GH3.1encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin.C.G.S.X.
0.096e-859At4g27260828834WES1encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin.C.G.S.X.
0.024e-654At1g48660841288auxin-responsive GH3 family proteinF:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;OPBMFC.G.S.X.
0.126e-550At5g54510835539DFL1 (DWARF IN LIGHT 1)Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).C.G.S.X.
0.034e-344At1g28130839706GH3.17encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin.C.G.S.X.
0.016e-240At2g41820818781leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.197e-24113Glycine maxGmaAffx.55925.1.S1_atBQ612189--2e-24At2g23170GH3.3C.G.S.X.
0.011e-138Hordeum vulgareContig19494_atContig19494--2e+0At4g16240unknown proteinC.G.S.X.
0.118e-963Oryza sativaOs07g0592600AK101193.1-GH3 homolog (Fragment)3e-16At2g14960GH3.1C.G.S.X.
0.237e-27123Populus trichocarpaPtpAffx.72392.1.A1_atCA824901GH3 family protein-2e-27At2g23170GH3.3C.G.S.X.
0.074e-344Triticum aestivumTaAffx.87187.1.S1_atCA594339--6e-6At2g14960GH3.1C.G.S.X.
0.121e-654Vitis vinifera1612001_s_atCF604676hypothetical protein LOC100250868-2e-14At1g59500GH3.4C.G.S.X.
0.055e-1375Zea maysZm.13354.1.S1_s_atAW067009indole-3-acetic acid-amido synthetase GH3.8-4e-12At2g14960GH3.1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0010252Maintenance of endogenous concentration of primary auxin equilibrium, or constant level of auxin in a biological system by a number of biochemical processes including transport, biosynthesis, catabolism and conjugation.
CGO:0009733A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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