Gene omics information

Query gene ID At2g23120
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At2g23120816844-F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PS.X.H.G.
1.00100.0At1g20450838633ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10)Encodes a gene induced by low temperature and dehydration. Inhibits e.coli growth while overexpressed. Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. LTI29 and LTI30 double overexpressors confer cold tolerance. Localized to membranes and cytoplasm.S.X.H.G.
0.8089.8At2g17840816293ERD7 (EARLY-RESPONSIVE TO DEHYDRATION 7)Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis.S.X.H.G.
0.6781.6At1g20440838632COR47 (COLD-REGULATED 47)Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. Cold regulated gene, amino acid sequence homology with Group II LEA (late embryogenesis abundant) proteins. Also responds to osmotic stress, ABA, dehydration and inhibits e.coli growth while overexpressed. COR47 and RAB18 double overexpressor plants are cold tolerant.S.X.H.G.
0.5773.8At1g01470837071LEA14 (LATE EMBRYOGENESIS ABUNDANT 14)Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
152.399.9GSM226548Slice6JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
59.199.8GSM226550Slice8JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
53.599.8GSM226542L12SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
41.199.8GSM218585Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
36.899.7GSM226549Slice7JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
29.699.7GSM184913Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
27.299.7GSM184914Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
24.399.6GSM218586Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
22.999.6GSM226553Slice11JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
22.099.6GSM218289At_NaCl_wermyb23-1GSE8787Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.315e-1063At2g23110816843-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.033e-238At4g23750828475CRF2 (CYTOKININ RESPONSE FACTOR 2)encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.C.G.S.X.
0.033e-238At3g18200821347nodulin MtN21 family proteinF:molecular_function unknown;P:unknown;C:endomembrane system, membrane;BOPAMFC.G.S.X.
0.033e-238At1g25560839143TEM1 (TEMPRANILLO 1)Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT.C.G.S.X.
0.071e-136At4g21920828281unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PC.G.S.X.
0.021e-136At2g17580816265polynucleotide adenylyltransferase family proteinF:RNA binding, nucleotidyltransferase activity;P:RNA processing;C:chloroplast;BOMFPVC.G.S.X.
0.065e-134At5g52975835376unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e-342Glycine maxPsAffx.C176000028_atPsAffx.C176000028--4e-3At2g23120-C.G.S.X.
0.051e-238Hordeum vulgareEBro08_SQ006_J16_atEBro08_SQ006_J16--6e-2At2g23120-C.G.S.X.
0.042e-136Oryza sativaOsAffx.9905.1.S1_at---0C.G.S.X.
0.043e+032Populus trichocarpaPtpAffx.71061.2.S1_atCK113850hypothetical protein-1e-31At1g77120ADH1 (ALCOHOL DEHYDROGENASE 1)C.G.S.X.
0.045e-134Triticum aestivumTaAffx.112700.1.S1_atCA619672--1e+0At2g23120-C.G.S.X.
0.042e+030Vitis vinifera1618959_atCB977982hypothetical protein LOC100247141-9e-1At5g20020RAN2C.G.S.X.
0.058e-132Zea maysZm.12112.1.A1_atBM382213hypothetical protein LOC100193982 /// hypothetical protein LOC100276462-3e-7At4g10810unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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